Seminal Simian Immunodeficiency Virus in Chronically Infected Cynomolgus Macaques Is Dominated by Virus Originating from Multiple Genital Organs

The HIV-1 transmission bottleneck

(2017) Samuel Mundia Kariuki et al.   Retrovirology

Clinical and Mucosal Immune Correlates of HIV-1 Semen Levels in Antiretroviral-Naive Men

(2017) Brendan J. W. Osborne et al.   Open Forum Infectious Diseases

HIV-1 is undetectable in preejaculatory secretions from HIV-1-infected men on suppressive HAART

(2016) Joseph A. Politch et al.   AIDS

Distinct cytokine/chemokine network in semen and blood characterize different stages of HIV infection

(2016) Christophe Vanpouille et al.   AIDS

Comparison of the effect of semen from HIV-infected and uninfected men on CD4+ T-cell infection

(2016) Céline Camus et al.   AIDS

HIV-1-RNA in seminal plasma correlates with detection of HIV-1-DNA in semen cells, but not with CMV shedding, among MSM on successful antiretroviral regimens: Table 1.

(2016) Pierre Gantner et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Systematic review of the literature on viral persistence and sexual transmission from recovered Ebola survivors: evidence and recommendations

(2016) Anna Thorson et al.   BMJ Open

Differences in the Selection Bottleneck between Modes of Sexual Transmission Influence the Genetic Composition of the HIV-1 Founder Virus

(2016) Damien C. Tully et al.   PLoS Pathogens

Detection of Simian Immunodeficiency Virus in Semen, Urethra, and Male Reproductive Organs during Efficient Highly Active Antiretroviral Therapy

(2015) G. Matusali et al.   JOURNAL OF VIROLOGY

A New Method for Rapid Screening of End-Point PCR Products: Application to Single Genome Amplified HIV and SIV Envelope Amplicons

(2015) Laurent Houzet et al.   PLoS One

Seminal Plasma HIV-1 RNA Concentration Is Strongly Associated with Altered Levels of Seminal Plasma Interferon-γ, Interleukin-17, and Interleukin-5

(2014) Jennifer C. Hoffman et al.   AIDS RESEARCH AND HUMAN RETROVIRUSES

Latent TGF-β1 is Compartmentalized Between Blood and Seminal Plasma of HIV-Positive Men and Its Activation in Semen is Negatively Correlated with Viral Load and Immune Activation

(2014) Jessica K. Kafka et al.   AMERICAN JOURNAL OF REPRODUCTIVE IMMUNOLOGY

Origins of HIV-infected Leukocytes and Virions in Semen

(2014) L. Houzet et al.   JOURNAL OF INFECTIOUS DISEASES

The Semen Microbiome and Its Relationship with Local Immunology and Viral Load in HIV Infection

(2014) Cindy M. Liu et al.   PLoS Pathogens

Shedding of HIV and Human Herpesviruses in the Semen of Effectively Treated HIV-1–Infected Men Who Have Sex With Men

(2013) Sara Gianella et al.   CLINICAL INFECTIOUS DISEASES

Distinct Cytokine Patterns in Semen Influence Local HIV Shedding and HIV Target Cell Activation

(2013) Abraham J. Olivier et al.   JOURNAL OF INFECTIOUS DISEASES

HIV Migration Between Blood and Cerebrospinal Fluid or Semen Over Time

(2013) Antoine Chaillon et al.   JOURNAL OF INFECTIOUS DISEASES

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Viral RNA Levels and env Variants in Semen and Tissues of Mature Male Rhesus Macaques Infected with SIV by Penile Inoculation

(2013) Francis Fieni et al.   PLoS One

Semen CD4+ T Cells and Macrophages Are Productively Infected at All Stages of SIV infection in Macaques

(2013) Sibylle Bernard-Stoecklin et al.   PLoS Pathogens

RAxML-Light: a tool for computing terabyte phylogenies

(2012) A. Stamatakis et al.   BIOINFORMATICS

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

The adult penile urethra is a novel entry site for HIV-1 that preferentially targets resident urethral macrophages

(2012) Y Ganor et al.   Mucosal Immunology

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Impact of Short-Term HAART Initiated during the Chronic Stage or Shortly Post-Exposure on SIV Infection of Male Genital Organs

(2012) Marina Moreau et al.   PLoS One

A Total-Evidence Approach to Dating with Fossils, Applied to the Early Radiation of the Hymenoptera

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Human Immunodeficiency Virus Infects Human Seminal Vesicles in Vitro and in Vivo

(2011) Claire Deleage et al.   AMERICAN JOURNAL OF PATHOLOGY

HIV Infection and Immune Defense of the Penis

(2011) Deborah Anderson et al.   AMERICAN JOURNAL OF REPRODUCTIVE IMMUNOLOGY

Semen of HIV-1–Infected Individuals: Local Shedding of Herpesviruses and Reprogrammed Cytokine Network

(2011) Andrea Lisco et al.   JOURNAL OF INFECTIOUS DISEASES

Associations between Virologic and Immunologic Dynamics in Blood and in the Male Genital Tract

(2011) S. Gianella et al.   JOURNAL OF VIROLOGY

Role of donor genital tract HIV-1 diversity in the transmission bottleneck

(2011) D. I. Boeras et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

HIV-1 Efficient Entry in Inner Foreskin Is Mediated by Elevated CCL5/RANTES that Recruits T Cells and Fuels Conjugate Formation with Langerhans Cells

(2011) Zhicheng Zhou et al.   PLoS Pathogens

Genital Tract Sequestration of SIV following Acute Infection

(2011) James B. Whitney et al.   PLoS Pathogens

HIV transmission risk through anal intercourse: systematic review, meta-analysis and implications for HIV prevention

(2010) Rebecca F Baggaley et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

HIV-1 Populations in Semen Arise through Multiple Mechanisms

(2010) Jeffrey A. Anderson et al.   PLoS Pathogens

HIV-1 infection of human penile explant tissue and protection by candidate microbicides

(2009) Lucia Fischetti et al.   AIDS

Estimating the proportion of HIV transmissions from main sex partners among men who have sex with men in five US cities

(2009) Patrick S Sullivan et al.   AIDS

Low-dose rectal inoculation of rhesus macaques by SIVsmE660 or SIVmac251 recapitulates human mucosal infection by HIV-1

(2009) Brandon F. Keele et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Human prostate supports more efficient replication of HIV-1 R5 than X4 strains ex vivo

(2009) Anna Le Tortorec et al.   Retrovirology

Bayesian Phylogeography Finds Its Roots

(2009) Philippe Lemey et al.   PLoS Computational Biology

Deciphering Human Immunodeficiency Virus Type 1 Transmission and Early Envelope Diversification by Single-Genome Amplification and Sequencing

(2008) J. F. Salazar-Gonzalez et al.   JOURNAL OF VIROLOGY

Accommodating the Effect of Ancient DNA Damage on Inferences of Demographic Histories

(2008) A. Rambaut et al.   MOLECULAR BIOLOGY AND EVOLUTION

Infection of Semen-Producing Organs by SIV during the Acute and Chronic Stages of the Disease

(2008) Anna Le Tortorec et al.   PLoS One