The quality of organic matter shapes the functional biogeography of bacterioplankton across boreal freshwater ecosystems

Dissolved organic carbon biolability decreases along with its modernization in fluvial networks in an ancient landscape

(2014) Jason B. Fellman et al.   ECOLOGY

Why are some microbes more ubiquitous than others? Predicting the habitat breadth of soil bacteria

(2014) Albert Barberán et al.   ECOLOGY LETTERS

What’s in an EEM? Molecular Signatures Associated with Dissolved Organic Fluorescence in Boreal Canada

(2014) A. Stubbins et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Large-scale patterns in summer diffusive CH4fluxes across boreal lakes, and contribution to diffusive C emissions

(2014) Terhi Rasilo et al.   GLOBAL CHANGE BIOLOGY

Fine-scale spatial patterns in bacterial community composition and function within freshwater ponds

(2014) Gavin Lear et al.   ISME Journal

Relationships between Bacterial Community Composition, Functional Trait Composition and Functioning Are Context Dependent – but What Is the Context?

(2014) Ina Severin et al.   PLoS One

The emergence and promise of functional biogeography

(2014) C. Violle et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Trait-based approaches for understanding microbial biodiversity and ecosystem functioning

(2014) Sascha Krause et al.   Frontiers in Microbiology

Seeing the forest for the genes: using metagenomics to infer the aggregated traits of microbial communities

(2014) Noah Fierer et al.   Frontiers in Microbiology

When, where and how does microbial community composition matter?

(2014) Diana R. Nemergut et al.   Frontiers in Microbiology

Controls of dissolved organic matter quality: evidence from a large-scale boreal lake survey

(2013) Dolly N. Kothawala et al.   GLOBAL CHANGE BIOLOGY

Using functional traits to investigate the determinants of crustacean zooplankton community structure

(2013) Richard J. Vogt et al.   OIKOS

Headwaters are critical reservoirs of microbial diversity for fluvial networks

(2013) K. Besemer et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Hydrologically driven seasonal changes in the sources and production mechanisms of dissolved organic carbon in a small lowland catchment

(2013) Thibault Lambert et al.   WATER RESOURCES RESEARCH

Increases in terrestrially derived carbon stimulate organic carbon processing and CO2 emissions in boreal aquatic ecosystems

(2013) Jean-François Lapierre et al.   Nature Communications

Phylogenetic conservatism of functional traits in microorganisms

(2012) Adam C Martiny et al.   ISME Journal

Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils

(2012) Byron C Crump et al.   ISME Journal

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Functional Biogeography of Ocean Microbes Revealed through Non-Negative Matrix Factorization

(2012) Xingpeng Jiang et al.   PLoS One

A trait-based framework for predicting when and where microbial adaptation to climate change will affect ecosystem functioning

(2011) Matthew D. Wallenstein et al.   BIOGEOCHEMISTRY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Exploration of community traits as ecological markers in microbial metagenomes

(2011) ALBERT BARBERÁN et al.   MOLECULAR ECOLOGY

Drivers of bacterial  -diversity depend on spatial scale

(2011) J. B. H. Martiny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial community assembly based on functional genes rather than species

(2011) C. Burke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Environmental distribution of prokaryotic taxa

(2010) Javier Tamames et al.   BMC MICROBIOLOGY

Direct measurement of the d13C signature of carbon respired by bacteria in lakes: Linkages to potential carbon sources, ecosystem baseline metabolism, and CO2 fluxes

(2010) S. Leigh McCallister et al.   LIMNOLOGY AND OCEANOGRAPHY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Dormancy contributes to the maintenance of microbial diversity

(2010) S. E. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Links between resources, C metabolism and the major components of bacterioplankton community structure across a range of freshwater ecosystems

(2009) Jérôme Comte et al.   ENVIRONMENTAL MICROBIOLOGY

Biophysical controls on organic carbon fluxes in fluvial networks

(2008) Tom J. Battin et al.   Nature Geoscience

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial Biogeography: From Taxonomy to Traits

(2008) J. L. Green et al.   SCIENCE