Exploration of community traits as ecological markers in microbial metagenomes

Phylogenetic ecology of widespread uncultured clades of the Kingdom Euryarchaeota

(2011) ALBERT BARBERÁN et al.   MOLECULAR ECOLOGY

A close relationship between primary nucleotides sequence structure and the composition of functional genes in the genome of prokaryotes

(2011) Juan A.L. Garcia et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Toward molecular trait-based ecology through integration of biogeochemical, geographical and metagenomic data

(2011) J. Raes et al.   Molecular Systems Biology

Amino acid signatures of salinity on an environmental scale with a focus on the Dead Sea

(2010) Matthew E. Rhodes et al.   ENVIRONMENTAL MICROBIOLOGY

Euxinic Freshwater Hypolimnia Promote Bacterial Endemicity in Continental Areas

(2010) Albert Barberán et al.   MICROBIAL ECOLOGY

Ribosomal RNA diversity predicts genome diversity in gut bacteria and their relatives

(2010) Jesse R. Zaneveld et al.   NUCLEIC ACIDS RESEARCH

Prokaryotic Genomes and Diversity in Surface Ocean Waters: Interrogating the Global Ocean Sampling Metagenome

(2009) E. J. Biers et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Global phylogenetic community structure and β-diversity patterns in surface bacterioplankton metacommunities

(2009) A Barberán et al.   AQUATIC MICROBIAL ECOLOGY

Metagenomic signatures of 86 microbial and viral metagenomes

(2009) Dana Willner et al.   ENVIRONMENTAL MICROBIOLOGY

Global ecological patterns in uncultured Archaea

(2009) Jean-Christophe Auguet et al.   ISME Journal

Microbial community structure and its functional implications

(2009) Jed A. Fuhrman   NATURE

Trait-Based Community Ecology of Phytoplankton

(2008) Elena Litchman et al.   Annual Review of Ecology Evolution and Systematics

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Abundant and diverse bacteria involved in DMSP degradation in marine surface waters

(2008) Erinn C. Howard et al.   ENVIRONMENTAL MICROBIOLOGY

Ecophysiological significance of scale-dependent patterns in prokaryotic genomes unveiled by a combination of statistic and genometric analyses

(2008) Juan A.L. Garcia et al.   GENOMICS

A Bioinformatician's Guide to Metagenomics

(2008) V. Kunin et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Functional metagenomic profiling of nine biomes

(2008) Elizabeth A. Dinsdale et al.   NATURE

Functional Traits and Niche-Based Tree Community Assembly in an Amazonian Forest

(2008) N. J. B. Kraft et al.   SCIENCE

Microbial Biogeography: From Taxonomy to Traits

(2008) J. L. Green et al.   SCIENCE

A simple, fast, and accurate method of phylogenomic inference

(2008) Martin Wu et al.   GENOME BIOLOGY