Localization and Evolution of Putative Triose Phosphate Translocators in the DiatomPhaeodactylum tricornutum

Protein Import and the Origin of Red Complex Plastids

(2015) Sven B. Gould et al.   CURRENT BIOLOGY

N-terminal lysines are essential for protein translocation via a modified ERAD system in complex plastids

(2015) Julia B. Lau et al.   MOLECULAR MICROBIOLOGY

Metabolic connectivity as a driver of host and endosymbiont integration

(2015) Slim Karkar et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In vivo Localization Studies in the Stramenopile Alga Nannochloropsis oceanica

(2015) Daniel Moog et al.   PROTIST

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Endosymbiotic theory for organelle origins

(2014) Verena Zimorski et al.   CURRENT OPINION IN MICROBIOLOGY

Chromera velia, Endosymbioses and the Rhodoplex Hypothesis—Plastid Evolution in Cryptophytes, Alveolates, Stramenopiles, and Haptophytes (CASH Lineages)

(2014) Jörn Petersen et al.   Genome Biology and Evolution

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

The evolution of photosynthesis in chromist algae through serial endosymbioses

(2014) John W. Stiller et al.   Nature Communications

The Number, Speed, and Impact of Plastid Endosymbioses in Eukaryotic Evolution

(2013) Patrick J. Keeling   Annual Review of Plant Biology

Ultrafast Approximation for Phylogenetic Bootstrap

(2013) B. Q. Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Three old and one new: protein import into red algal-derived plastids surrounded by four membranes

(2013) Simone Stork et al.   PROTOPLASMA

Distribution of the SELMA Translocon in Secondary Plastids of Red Algal Origin and Predicted Uncoupling of Ubiquitin-Dependent Translocation from Degradation

(2012) Simone Stork et al.   EUKARYOTIC CELL

Apicoplast triose phosphate transporter (TPT) gene knockout is lethal for Plasmodium

(2012) Tanushree Banerjee et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Cyanophora paradoxa Genome Elucidates Origin of Photosynthesis in Algae and Plants

(2012) D. C. Price et al.   SCIENCE

Connecting the Plastid: Transporters of the Plastid Envelope and Their Role in Linking Plastidial with Cytosolic Metabolism

(2011) Andreas P.M. Weber et al.   Annual Review of Plant Biology

Making new out of old: Recycling and modification of an ancient protein translocation system during eukaryotic evolution

(2011) Kathrin Bolte et al.   BIOESSAYS

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

Proteinortho: Detection of (Co-)orthologs in large-scale analysis

(2011) Marcus Lechner et al.   BMC BIOINFORMATICS

In Silico and In Vivo Investigations of Proteins of a Minimized Eukaryotic Cytoplasm

(2011) Daniel Moog et al.   Genome Biology and Evolution

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

The plastid outer envelope – a highly dynamic interface between plastid and cytoplasm

(2011) rederique K. H. Breuers   Frontiers in Plant Science

The Toxoplasma Apicoplast Phosphate Translocator Links Cytosolic and Apicoplast Metabolism and Is Essential for Parasite Survival

(2010) Carrie F. Brooks et al.   Cell Host & Microbe

Evolutionary origins of metabolic compartmentalization in eukaryotes

(2010) W. Martin   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

The Puzzle of Plastid Evolution

(2009) John M. Archibald   CURRENT BIOLOGY

The carbon and energy sources of the non-photosynthetic plastid in the malaria parasite

(2009) Liting Lim et al.   FEBS LETTERS

Filling the Gap, Evolutionarily Conserved Omp85 in Plastids of Chromalveolates

(2009) Lars Bullmann et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ERAD-Derived Preprotein Transport across the Second Outermost Plastid Membrane of Diatoms

(2009) F. Hempel et al.   MOLECULAR BIOLOGY AND EVOLUTION

Plastid Evolution

(2008) Sven B. Gould et al.   Annual Review of Plant Biology