Cross-species systems analysis of evolutionary toolkits of neurogenomic response to social challenge

Behavioral, transcriptomic and epigenetic responses to social challenge in honey bees

(2017) H. Y. Shpigler et al.   GENES BRAIN AND BEHAVIOR

Transcriptional regulatory dynamics drive coordinated metabolic and neural response to social challenge in mice

(2017) Michael C. Saul et al.   GENOME RESEARCH

Comparative transcriptomics in human and mouse

(2017) Alessandra Breschi et al.   NATURE REVIEWS GENETICS

Deep evolutionary conservation of autism-related genes

(2017) Hagai Y. Shpigler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temporal dynamics of neurogenomic plasticity in response to social interactions in male threespined sticklebacks

(2017) Syed Abbas Bukhari et al.   PLoS Genetics

Transcriptome analysis of genes and gene networks involved in aggressive behavior in mouse and zebrafish

(2016) Karim Malki et al.   AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS

Characterizing gene sets using discriminative random walks with restart on heterogeneous biological networks

(2016) Charles Blatti et al.   BIOINFORMATICS

Redeployment of a conserved gene regulatory network during Aedes aegypti development

(2016) Kushal Suryamohan et al.   DEVELOPMENTAL BIOLOGY

Aggression in non-human vertebrates: Genetic mechanisms and molecular pathways

(2015) Florian Freudenberg et al.   AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS

Aggression is associated with aerobic glycolysis in the honey bee brain1

(2015) S. Chandrasekaran et al.   GENES BRAIN AND BEHAVIOR

Npas4 Regulates Excitatory-Inhibitory Balance within Neural Circuits through Cell-Type-Specific Gene Programs

(2014) Ivo Spiegel et al.   CELL

Tachykinin-Expressing Neurons Control Male-Specific Aggressive Arousal in Drosophila

(2014) Kenta Asahina et al.   CELL

Evidence for Deep Regulatory Similarities in Early Developmental Programs across Highly Diverged Insects

(2014) Majid Kazemian et al.   Genome Biology and Evolution

When Life Got Smart: The Evolution of Behavioral Complexity Through the Ediacaran and Early Cambrian of NW Canada

(2014) Calla Carbone et al.   JOURNAL OF PALEONTOLOGY

Comparative analysis of the transcriptome across distant species

(2014) Mark B. Gerstein et al.   NATURE

OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software

(2014) Evgenia V. Kriventseva et al.   NUCLEIC ACIDS RESEARCH

Rax-CreERT2 Knock-In Mice: A Tool for Selective and Conditional Gene Deletion in Progenitor Cells and Radial Glia of the Retina and Hypothalamus

(2014) Thomas Pak et al.   PLoS One

Neuromolecular responses to social challenge: Common mechanisms across mouse, stickleback fish, and honey bee

(2014) Clare C. Rittschof et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparison of the transcriptional landscapes between human and mouse tissues

(2014) Shin Lin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tailless and Atrophin control Drosophila aggression by regulating neuropeptide signalling in the pars intercerebralis

(2014) Shaun M. Davis et al.   Nature Communications

OrthoClust: an orthology-based network framework for clustering data across multiple species

(2014) Koon-Kiu Yan et al.   GENOME BIOLOGY

NR4A orphan nuclear receptors in glucose homeostasis: A minireview

(2013) A.F. Close et al.   DIABETES & METABOLISM

Dysregulation of Vascular Endothelial Growth Factors and Their Neuropilin Receptors in the Eutopic Endometrium of Women With Endometriosis

(2013) A.J. Hey-Cunningham et al.   Reproductive Sciences

Purine nucleosides: endogenous neuroprotectants in hypoxic brain

(2012) Bettina Thauerer et al.   JOURNAL OF NEUROCHEMISTRY

Differential roles for Nr4a1 and Nr4a2 in object location vs. object recognition long-term memory

(2012) S. E. McNulty et al.   LEARNING & MEMORY

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

Trace fossil evidence for Ediacaran bilaterian animals with complex behaviors

(2012) Zhe Chen et al.   PRECAMBRIAN RESEARCH

Evolution of a Vertebrate Social Decision-Making Network

(2012) L. A. O'Connell et al.   SCIENCE

Evolution of Gene Regulatory Networks Controlling Body Plan Development

(2011) Isabelle S. Peter et al.   CELL

Loss of Hemolectin reduces the survival of Drosophila larvae after wounding

(2011) Huan-Jui Chang et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Behavior-specific changes in transcriptional modules lead to distinct and predictable neurogenomic states

(2011) S. Chandrasekaran et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ensembl BioMarts: a hub for data retrieval across taxonomic space

(2011) R. J. Kinsella et al.   Database-The Journal of Biological Databases and Curation

Widespread transcription at neuronal activity-regulated enhancers

(2010) Tae-Kyung Kim et al.   NATURE

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The P2X7 purinergic receptor: from physiology to neurological disorders

(2009) Stephen D. Skaper et al.   FASEB JOURNAL

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Activity-dependent regulation of inhibitory synapse development by Npas4

(2008) Yingxi Lin et al.   NATURE