Transcriptional and translational dynamics during maternal-to-zygotic transition in early chicken development

Broad histone H3K4me3 domains in mouse oocytes modulate maternal-to-zygotic transition

(2016) John Arne Dahl et al.   NATURE

The landscape of accessible chromatin in mammalian preimplantation embryos

(2016) Jingyi Wu et al.   NATURE

DAZLExpression Explains Origin and Central Formation of Primordial Germ Cells in Chickens

(2016) Hyung Chul Lee et al.   STEM CELLS AND DEVELOPMENT

Cellular analysis of cleavage-stage chick embryos reveals hidden conservation in vertebrate early development

(2015) H. Nagai et al.   DEVELOPMENT

Paternal H3K4 methylation is required for minor zygotic gene activation and early mouse embryonic development

(2015) K. Aoshima et al.   EMBO REPORTS

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Characterization of the finch embryo supports evolutionary conservation of the naive stage of development in amniotes

(2015) Siu-Shan Mak et al.   eLife

Zygotic Genome Activation During the Maternal-to-Zygotic Transition

(2014) Miler T. Lee et al.   Annual Review of Cell and Developmental Biology

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Small non-coding RNA profiling and the role of piRNA pathway genes in the protection of chicken primordial germ cells

(2014) Deivendran Rengaraj et al.   BMC GENOMICS

Nanog, Pou5f1 and SoxB1 activate zygotic gene expression during the maternal-to-zygotic transition

(2013) Miler T. Lee et al.   NATURE

Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing

(2013) Zhigang Xue et al.   NATURE

Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells

(2013) Liying Yan et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Pou5f1 Transcription Factor Controls Zygotic Gene Activation In Vertebrates

(2013) M. Leichsenring et al.   SCIENCE

Expression of Variant Ribosomal RNA Genes in Mouse Oocytes and Preimplantation Embryos1

(2011) Motomasa Ihara et al.   BIOLOGY OF REPRODUCTION

Prepatterning of Developmental Gene Expression by Modified Histones before Zygotic Genome Activation

(2011) Leif C. Lindeman et al.   DEVELOPMENTAL CELL

MicroRNA-mediated posttranscriptional regulation is required for maintaining undifferentiated properties of blastoderm and primordial germ cells in chickens

(2011) S. I. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The role of miRNAs and endogenous siRNAs in maternal-to-zygotic reprogramming and the establishment of pluripotency

(2010) Petr Svoboda et al.   EMBO REPORTS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The maternal-to-zygotic transition: a play in two acts

(2009) W. Tadros et al.   DEVELOPMENT

A Hierarchy of H3K4me3 and H3K27me3 Acquisition in Spatial Gene Regulation in Xenopus Embryos

(2009) Robert C. Akkers et al.   DEVELOPMENTAL CELL

The dynamics of gene products fluctuation during bovine pre-hatching development

(2009) Isabelle Gilbert et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

Deadenylation of maternal mRNAs mediated by miR-427 in Xenopus laevis embryos

(2009) E. Lund et al.   RNA

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS