Multifaceted DNA metabarcoding: Validation of a noninvasive, next-generation approach to studying bat populations

Patterns of seasonality and group membership characterize the gut microbiota in a longitudinal study of wild Verreaux's sifakas (Propithecus verreauxi )

(2017) Andrea Springer et al.   Ecology and Evolution

Population- and Individual-Level Dynamics of the Intestinal Microbiota of a Small Primate

(2016) Tuomas Aivelo et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

High-throughput microsatellite genotyping in ecology: improved accuracy, efficiency, standardization and success with low-quantity and degraded DNA

(2016) M. De Barba et al.   Molecular Ecology Resources

Database Resources of the National Center for Biotechnology Information

(2016)   NUCLEIC ACIDS RESEARCH

MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data

(2016) Daniel H. Huson et al.   PLoS Computational Biology

Are Microsatellite Fragment Lengths Useful for Population-Level Studies? The Case ofPolygala lewtonii(Polygalaceae)

(2016) Charlotte C. Germain-Aubrey et al.   Applications in Plant Sciences

DNA metabarcoding of insects and allies: an evaluation of primers and pipelines

(2015) G.-J. Brandon-Mong et al.   BULLETIN OF ENTOMOLOGICAL RESEARCH

MicNeSs: genotyping microsatellite loci from a collection of (NGS) reads

(2015) Marie Suez et al.   Molecular Ecology Resources

obitools: aunix-inspired software package for DNA metabarcoding

(2015) Frédéric Boyer et al.   Molecular Ecology Resources

Accurate multiplexing and filtering for high-throughput amplicon-sequencing

(2015) Philippe Esling et al.   NUCLEIC ACIDS RESEARCH

Tracking year-to-year changes in intestinal nematode communities of rufous mouse lemurs (Microcebus rufus)

(2015) TUOMAS AIVELO et al.   PARASITOLOGY

Bats initiate vital agroecological interactions in corn

(2015) Josiah J. Maine et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Checklist of the Helminth Parasites of South American Bats

(2015) CLÁUDIA PORTES SANTOS et al.   ZOOTAXA

Repeated horizontal transfers of four DNA transposons in invertebrates and bats

(2015) Zhou Tang et al.   Mobile DNA

DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

(2014) B. E. Deagle et al.   Biology Letters

Environmental metabarcodes for insects:in silicoPCR reveals potential for taxonomic bias

(2014) Laurence J. Clarke et al.   Molecular Ecology Resources

Who's for dinner? High-throughput sequencing reveals bat dietary differentiation in a biodiversity hotspot where prey taxonomy is largely undescribed

(2013) Joanna M. Burgar et al.   MOLECULAR ECOLOGY

Improving accuracy of DNA diet estimates using food tissue control materials and an evaluation of proxies for digestion bias

(2013) Austen C. Thomas et al.   MOLECULAR ECOLOGY

Advances in sex determination in bats and its utility in wind-wildlife studies

(2013) J. M. Korstian et al.   Molecular Ecology Resources

DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet

(2013) M. De Barba et al.   Molecular Ecology Resources

Bat white-nose syndrome: a real-time TaqMan polymerase chain reaction test targeting the intergenic spacer region of Geomyces destructans

(2013) Laura K. Muller et al.   MYCOLOGIA

A DNA Metabarcoding Study of a Primate Dietary Diversity and Plasticity across Its Entire Fragmented Range

(2013) Erwan Quéméré et al.   PLoS One

Next Generation Sequencing of Fecal DNA Reveals the Dietary Diversity of the Widespread Insectivorous Predator Daubenton’s Bat (Myotis daubentonii) in Southwestern Finland

(2013) Eero J. Vesterinen et al.   PLoS One

Shedding new light on the diet of Norwegian lemmings: DNA metabarcoding of stomach content

(2013) Eeva M. Soininen et al.   POLAR BIOLOGY

Hair trapping with valerian-treated lure sticks as a tool for genetic wildcat monitoring in low-density habitats

(2012) Katharina Steyer et al.   EUROPEAN JOURNAL OF WILDLIFE RESEARCH

Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan

(2012) WASIM SHEHZAD et al.   MOLECULAR ECOLOGY

Towards next-generation biodiversity assessment using DNA metabarcoding

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Ecosystem services provided by bats

(2011) Thomas H. Kunz et al.   Annals of the New York Academy of Sciences

A New Host and Three New Geographic Distribution Records for Trematodes (Digenea: Lecithodendriidae) from the Eastern Pipistrelle, Perimyotis subflavus (Chiroptera: Vespertilionidae), in Arkansas, U.S.A.

(2011) Chris T. McAllister et al.   COMPARATIVE PARASITOLOGY

Who is eating what: diet assessment using next generation sequencing

(2011) FRANCOIS POMPANON et al.   MOLECULAR ECOLOGY

Eating local: influences of habitat on the diet of little brown bats (Myotis lucifugus)

(2011) E. L. CLARE et al.   MOLECULAR ECOLOGY

Hit or miss in phylogeographic analyses: the case of the cryptic NUMTs

(2011) CORALIE BERTHEAU et al.   Molecular Ecology Resources

Experimental infection of bats with Geomyces destructans causes white-nose syndrome

(2011) Jeffrey M. Lorch et al.   NATURE

Has the Earth’s sixth mass extinction already arrived?

(2011) Anthony D. Barnosky et al.   NATURE

Effective non-invasive genetic monitoring of multiple wild western gorilla groups

(2010) M. Arandjelovic et al.   BIOLOGICAL CONSERVATION

Taxon-specific PCR for DNA barcoding arthropod prey in bat faeces

(2010) MATT R. K. ZEALE et al.   Molecular Ecology Resources

Pathologic Findings and Liver Elements in Hibernating Bats With White-Nose Syndrome

(2010) F. Courtin et al.   VETERINARY PATHOLOGY

Disentangling taxonomy within the Rhabditis (Pellioditis) marina (Nematoda, Rhabditidae) species complex using molecular and morhological tools

(2010) S. DERYCKE et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Development and characterization of 15 polymorphic microsatellite loci isolated from Rafinesque's big-eared bat,Corynorhinus rafinesquii

(2009) ANTOINETTE J. PIAGGIO et al.   Molecular Ecology Resources

Development of primers for the mitochondrial cytochromecoxidase I gene in digenetic trematodes (Platyhelminthes) illustrates the challenge of barcoding parasitic helminths

(2009) ANNA MOSZCZYNSKA et al.   Molecular Ecology Resources

Advancing ecological understandings through technological transformations in noninvasive genetics

(2009) ALBANO BEJA-PEREIRA et al.   Molecular Ecology Resources

INVITED REVIEW: Molecular analysis of predation: a review of best practice for DNA-based approaches

(2008) R. A. KING et al.   MOLECULAR ECOLOGY

Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified

(2008) H. Song et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA