Patterns of seasonality and group membership characterize the gut microbiota in a longitudinal study of wild Verreaux's sifakas (Propithecus verreauxi )

Incorporating the gut microbiota into models of human and non-human primate ecology and evolution

(2016) Katherine R. Amato   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

Host age, social group, and habitat type influence the gut microbiota of wild ring-tailed lemurs (Lemur catta)

(2016) Genevieve Bennett et al.   AMERICAN JOURNAL OF PRIMATOLOGY

Sex and seasonal differences in diet and nutrient intake in Verreaux's sifakas (Propithecus verreauxi)

(2016) Flávia Koch et al.   AMERICAN JOURNAL OF PRIMATOLOGY

Population- and Individual-Level Dynamics of the Intestinal Microbiota of a Small Primate

(2016) Tuomas Aivelo et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Intergroup encounters in Verreaux’s sifakas (Propithecus verreauxi): who fights and why?

(2016) Flávia Koch et al.   BEHAVIORAL ECOLOGY AND SOCIOBIOLOGY

Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies

(2016) Daryl M Gohl et al.   NATURE BIOTECHNOLOGY

The effect of host genetics on the gut microbiome

(2016) Marc Jan Bonder et al.   NATURE GENETICS

Association of host genome with intestinal microbial composition in a large healthy cohort

(2016) Williams Turpin et al.   NATURE GENETICS

Looking for a Signal in the Noise: Revisiting Obesity and the Microbiome

(2016) Marc A. Sze et al.   mBio

The Gut Microbiota Modulates Energy Metabolism in the Hibernating Brown Bear Ursus arctos

(2016) Felix Sommer et al.   Cell Reports

NINJA-OPS: Fast Accurate Marker Gene Alignment Using Concatenated Ribosomes

(2016) Gabriel A. Al-Ghalith et al.   PLoS Computational Biology

Social behavior shapes the chimpanzee pan-microbiome

(2016) A. H. Moeller et al.   Science Advances

The Gut Microbiome of Wild Lemurs: A Comparison of Sympatric Lemur catta and Propithecus verreauxi

(2015) Andrew T. Fogel   FOLIA PRIMATOLOGICA

Temporal variation selects for diet–microbe co-metabolic traits in the gut of Gorilla spp

(2015) Andres Gomez et al.   ISME Journal

Rethinking heritability of the microbiome

(2015) Edward J. van Opstal et al.   SCIENCE

Social networks predict gut microbiome composition in wild baboons

(2015) Jenny Tung et al.   eLife

Sex, Body Mass Index, and Dietary Fiber Intake Influence the Human Gut Microbiome

(2015) Christine Dominianni et al.   PLoS One

Patterns of Gut Bacterial Colonization in Three Primate Species

(2015) Erin A. McKenney et al.   PLoS One

The role of gut microbes in satisfying the nutritional demands of adult and juvenile wild, black howler monkeys (Alouatta pigra)

(2014) Katherine R. Amato et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

Biomass Utilization by Gut Microbiomes

(2014) Bryan A. White et al.   Annual Review of Microbiology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The Devil Lies in the Details: How Variations in Polysaccharide Fine-Structure Impact the Physiology and Evolution of Gut Microbes

(2014) Eric C. Martens et al.   JOURNAL OF MOLECULAR BIOLOGY

The Gut Microbiota Appears to Compensate for Seasonal Diet Variation in the Wild Black Howler Monkey (Alouatta pigra)

(2014) Katherine R. Amato et al.   MICROBIAL ECOLOGY

Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences

(2014) Pablo Yarza et al.   NATURE REVIEWS MICROBIOLOGY

Gut microbiome of the Hadza hunter-gatherers

(2014) Stephanie L. Schnorr et al.   Nature Communications

Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes

(2013) Katherine R Amato et al.   ISME Journal

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

The gut microbiota — masters of host development and physiology

(2013) Felix Sommer et al.   NATURE REVIEWS MICROBIOLOGY

The Long-Term Stability of the Human Gut Microbiota

(2013) J. J. Faith et al.   SCIENCE

Diet-Induced Alterations of Host Cholesterol Metabolism Are Likely To Affect the Gut Microbiota Composition in Hamsters

(2012) Inés Martínez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Host Remodeling of the Gut Microbiome and Metabolic Changes during Pregnancy

(2012) Omry Koren et al.   CELL

The Impact of the Gut Microbiota on Human Health: An Integrative View

(2012) Jose C. Clemente et al.   CELL

Dietary shifts affect the gastrointestinal microflora of the giant panda (Ailuropoda melanoleuca)

(2012) C. L. Williams et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Factors associated with the diversification of the gut microbial communities within chimpanzees from Gombe National Park

(2012) P. H. Degnan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Chimeric Genome of Sphaerochaeta: Nonspiral Spirochetes That Break with the Prevalent Dogma in Spirochete Biology

(2012) A. Caro-Quintero et al.   mBio

Microbial Co-occurrence Relationships in the Human Microbiome

(2012) Karoline Faust et al.   PLoS Computational Biology

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

(2012) Xochitl C Morgan et al.   GENOME BIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Colonization-Induced Host-Gut Microbial Metabolic Interaction

(2011) S. P. Claus et al.   mBio

Genotype Is a Stronger Determinant than Sex of the Mouse Gut Microbiota

(2010) Amir Kovacs et al.   MICROBIAL ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Succession of microbial consortia in the developing infant gut microbiome

(2010) J. E. Koenig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The role of pH in determining the species composition of the human colonic microbiota

(2009) Sylvia H. Duncan et al.   ENVIRONMENTAL MICROBIOLOGY

Diet-Induced Obesity Is Linked to Marked but Reversible Alterations in the Mouse Distal Gut Microbiome

(2008) Peter J. Turnbaugh et al.   Cell Host & Microbe