Keystone taxa predict compositional change in microbial communities

Cohesion: a method for quantifying the connectivity of microbial communities

(2017) Cristina M Herren et al.   ISME Journal

Stochastic Community Assembly: Does It Matter in Microbial Ecology?

(2017) Jizhong Zhou et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Keystone microbial taxa regulate the invasion of a fungal pathogen in agro-ecosystems

(2017) P. Trivedi et al.   SOIL BIOLOGY & BIOCHEMISTRY

Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

(2017) Amnon Amir et al.   mSystems

No complexity–stability relationship in empirical ecosystems

(2016) Claire Jacquet et al.   Nature Communications

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

(2016) Matthew T. Agler et al.   PLOS BIOLOGY

Testing the Neutral Theory of Biodiversity with Human Microbiome Datasets

(2016) Lianwei Li et al.   Scientific Reports

Cross-depth analysis of marine bacterial networks suggests downward propagation of temporal changes

(2015) Jacob A Cram et al.   ISME Journal

Global distribution and vertical patterns of a prymnesiophyte–cyanobacteria obligate symbiosis

(2015) Ana M Cabello et al.   ISME Journal

Ecology and exploration of the rare biosphere

(2015) Michael D. J. Lynch et al.   NATURE REVIEWS MICROBIOLOGY

Metabolic dependencies drive species co-occurrence in diverse microbial communities

(2015) Aleksej Zelezniak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The ecology of the microbiome: Networks, competition, and stability

(2015) K. Z. Coyte et al.   SCIENCE

Ecology of bacteria in the human gastrointestinal tract—identification of keystone and foundation taxa

(2015) Pål Trosvik et al.   Microbiome

Dynamics in microbial communities: unraveling mechanisms to identify principles

(2014) Allan Konopka et al.   ISME Journal

Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years

(2014) Jacob A Cram et al.   ISME Journal

Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity

(2014) A. Shade et al.   mBio

Deciphering microbial interactions and detecting keystone species with co-occurrence networks

(2014) David Berry et al.   Frontiers in Microbiology

Modular community structure suggests metabolic plasticity during the transition to polar night in ice-covered Antarctic lakes

(2013) Trista J Vick-Majors et al.   ISME Journal

Metabolic modeling of species interaction in the human microbiome elucidates community-level assembly rules

(2013) R. Levy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intraspecific density dependence and a guild of consumers coexisting on one resource

(2012) Mark A. McPeek   ECOLOGY

Stability criteria for complex ecosystems

(2012) Stefano Allesina et al.   NATURE

Diversity of Interaction Types and Ecological Community Stability

(2012) A. Mougi et al.   SCIENCE

Microbial seed banks: the ecological and evolutionary implications of dormancy

(2011) Jay T. Lennon et al.   NATURE REVIEWS MICROBIOLOGY