Gene expression and ultrastructure of meso- and thermophilic methanotrophic consortia

Electrically conductive pili from pilin genes of phylogenetically diverse microorganisms

(2017) David JF Walker et al.   ISME Journal

Reverse Methanogenesis and Respiration in Methanotrophic Archaea

(2017) Peer H. A. Timmers et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

Candidatus Desulfofervidus auxilii, a hydrogenotrophic sulfate-reducing bacterium involved in the thermophilic anaerobic oxidation of methane

(2016) Viola Krukenberg et al.   ENVIRONMENTAL MICROBIOLOGY

Happy together: microbial communities that hook up to swap electrons

(2016) Derek R Lovley   ISME Journal

Thermophilic archaea activate butane via alkyl-coenzyme M formation

(2016) Rafael Laso-Pérez et al.   NATURE

The biosynthetic pathway of coenzyme F430 in methanogenic and methanotrophic archaea

(2016) Kaiyuan Zheng et al.   SCIENCE

Thermal and geochemical influences on microbial biogeography in the hydrothermal sediments of Guaymas Basin, Gulf of California

(2016) Luke McKay et al.   Environmental Microbiology Reports

Methane Seep in Shallow-Water Permeable Sediment Harbors High Diversity of Anaerobic Methanotrophic Communities, Elba, Italy

(2016) S. Emil Ruff et al.   Frontiers in Microbiology

Microbial Communities in Methane- and Short Chain Alkane-Rich Hydrothermal Sediments of Guaymas Basin

(2016) Frederick Dowell et al.   Frontiers in Microbiology

Metabolic Capabilities of Microorganisms Involved in and Associated with the Anaerobic Oxidation of Methane

(2016) Gunter Wegener et al.   Frontiers in Microbiology

The FlxABCD-HdrABC proteins correspond to a novel NADH dehydrogenase/heterodisulfide reductase widespread in anaerobic bacteria and involved in ethanol metabolism inDesulfovibrio vulgaris Hildenborough

(2015) Ana Raquel Ramos et al.   ENVIRONMENTAL MICROBIOLOGY

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Activity and interactions of methane seep microorganisms assessed by parallel transcription and FISH-NanoSIMS analyses

(2015) Anne E Dekas et al.   ISME Journal

Heterotrimeric NADH-Oxidizing Methylenetetrahydrofolate Reductase from the Acetogenic Bacterium Acetobacterium woodii

(2015) Johannes Bertsch et al.   JOURNAL OF BACTERIOLOGY

Intercellular wiring enables electron transfer between methanotrophic archaea and bacteria

(2015) Gunter Wegener et al.   NATURE

Single cell activity reveals direct electron transfer in methanotrophic consortia

(2015) Shawn E. McGlynn et al.   NATURE

The archaellum: how archaea swim

(2015) Sonja-Verena Albers et al.   Frontiers in Microbiology

The “bacterial heterodisulfide” DsrC is a key protein in dissimilatory sulfur metabolism

(2014) S.S. Venceslau et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

QUAST: quality assessment tool for genome assemblies

(2013) Alexey Gurevich et al.   BIOINFORMATICS

A new model for electron flow during anaerobic digestion: direct interspecies electron transfer to Methanosaeta for the reduction of carbon dioxide to methane

(2013) Amelia-Elena Rotaru et al.   Energy & Environmental Science

Methanotrophic archaea possessing diverging methane-oxidizing and electron-transporting pathways

(2013) Feng-Ping Wang et al.   ISME Journal

Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage

(2013) Mohamed F. Haroon et al.   NATURE

Seafloor oxygen consumption fuelled by methane from cold seeps

(2013) Antje Boetius et al.   Nature Geoscience

Detection of Putatively Thermophilic Anaerobic Methanotrophs in Diffuse Hydrothermal Vent Fluids

(2012) Alexander Y. Merkel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Energy conservation via electron bifurcating ferredoxin reduction and proton/Na+ translocating ferredoxin oxidation

(2012) Wolfgang Buckel et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Unifying concepts in anaerobic respiration: Insights from dissimilatory sulfur metabolism

(2012) Fabian Grein et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

(2012) Evguenia Kopylova et al.   BIOINFORMATICS

Lack of cytochrome involvement in long-range electron transport through conductive biofilms and nanowires of Geobacter sulfurreducens

(2012) Nikhil S. Malvankar et al.   Energy & Environmental Science

Immunological detection of enzymes for sulfate reduction in anaerobic methane-oxidizing consortia

(2012) Jana Milucka et al.   ENVIRONMENTAL MICROBIOLOGY

Integrated metagenomic and metaproteomic analyses of an ANME-1-dominated community in marine cold seep sediments

(2012) Runar Stokke et al.   ENVIRONMENTAL MICROBIOLOGY

Distribution andin situabundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments

(2012) Sara Kleindienst et al.   ENVIRONMENTAL MICROBIOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Zero-valent sulphur is a key intermediate in marine methane oxidation

(2012) Jana Milucka et al.   NATURE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Autotrophy as a predominant mode of carbon fixation in anaerobic methane-oxidizing microbial communities

(2012) M. Y. Kellermann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The membrane QmoABC complex interacts directly with the dissimilatory adenosine 5′-phosphosulfate reductase in sulfate reducing bacteria

(2012) Ana Raquel Ramos   Frontiers in Microbiology

Thermophilic anaerobic oxidation of methane by marine microbial consortia

(2011) Thomas Holler et al.   ISME Journal

Tunable metallic-like conductivity in microbial nanowire networks

(2011) Nikhil S. Malvankar et al.   Nature Nanotechnology

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

A Comparative Genomic Analysis of Energy Metabolism in Sulfate Reducing Bacteria and Archaea

(2011) Inês A. Cardoso Pereira et al.   Frontiers in Microbiology

PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes

(2010) Nancy Y. Yu et al.   BIOINFORMATICS

The Qrc Membrane Complex, Related to the Alternative Complex III, Is a Menaquinone Reductase Involved in Sulfate Respiration

(2010) Sofia S. Venceslau et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Direct Exchange of Electrons Within Aggregates of an Evolved Syntrophic Coculture of Anaerobic Bacteria

(2010) Z. M. Summers et al.   SCIENCE

Anaerobic Oxidation of Methane: Progress with an Unknown Process

(2009) Katrin Knittel et al.   Annual Review of Microbiology

Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group

(2009) Anke Meyerdierks et al.   ENVIRONMENTAL MICROBIOLOGY

Deep-Sea Archaea Fix and Share Nitrogen in Methane-Consuming Microbial Consortia

(2009) A. E. Dekas et al.   SCIENCE

Discovery of a Ferredoxin:NAD+-Oxidoreductase (Rnf) in Acetobacterium woodii

(2008) Volker Müller et al.   Annals of the New York Academy of Sciences

Coenzyme F420-Dependent Sulfite Reductase-Enabled Sulfite Detoxification and Use of Sulfite as a Sole Sulfur Source by Methanococcus maripaludis

(2008) E. F. Johnson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mutagenesis of the C1 Oxidation Pathway in Methanosarcina barkeri: New Insights into the Mtr/Mer Bypass Pathway

(2008) P. V. Welander et al.   JOURNAL OF BACTERIOLOGY

Hydrothermal vents and the origin of life

(2008) William Martin et al.   NATURE REVIEWS MICROBIOLOGY