Size-reduced embryos reveal a gradient scaling-based mechanism for zebrafish somite formation

Time-lapse observation of stepwise regression of Erk activity in zebrafish presomitic mesoderm

(2018) Dini Wahyu Kartika Sari et al.   Scientific Reports

Self-Organization of Embryonic Genetic Oscillators into Spatiotemporal Wave Patterns

(2016) Charisios D. Tsiairis et al.   CELL

Species-specific contribution of volumetric growth and tissue convergence to posterior body elongation in vertebrates

(2016) Ben Steventon et al.   DEVELOPMENT

Dynamics of the slowing segmentation clock reveal alternating two-segment periodicity

(2015) N. P. Shih et al.   DEVELOPMENT

Continuum theory of gene expression waves during vertebrate segmentation

(2015) David J Jörg et al.   NEW JOURNAL OF PHYSICS

A Local, Self-Organizing Reaction-Diffusion Model Can Explain Somite Patterning in Embryos

(2015) James Cotterell et al.   Cell Systems

Models in biology: ‘accurate descriptions of our pathetic thinking’

(2014) Jeremy Gunawardena   BMC BIOLOGY

An anterior limit of FGF/Erk signal activity marks the earliest future somite boundary in zebrafish

(2014) R. Akiyama et al.   DEVELOPMENT

Spatial gradients of protein-level time delays set the pace of the traveling segmentation clock waves

(2014) A. Ay et al.   DEVELOPMENT

Pulses of Notch activation synchronise oscillating somite cells and entrain the zebrafish segmentation clock

(2014) C. Soza-Ried et al.   DEVELOPMENT

Wnt-regulated dynamics of positional information in zebrafish somitogenesis

(2014) L. Bajard et al.   DEVELOPMENT

Signalling dynamics in vertebrate segmentation

(2014) Alexis Hubaud et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

A Doppler effect in embryonic pattern formation

(2014) D. Soroldoni et al.   SCIENCE

Scaling of Dorsal-Ventral Patterning by Embryo Size-Dependent Degradation of Spemann’s Organizer Signals

(2013) Hidehiko Inomata et al.   CELL

Mechanisms of scaling in pattern formation

(2013) D. M. Umulis et al.   DEVELOPMENT

Modular development of the teleost trunk along the dorsoventral axis and zic1/zic4 as selector genes in the dorsal module

(2013) T. Kawanishi et al.   DEVELOPMENT

Crosstalk between Fgf and Wnt signaling in the zebrafish tailbud

(2012) Michael J. Stulberg et al.   DEVELOPMENTAL BIOLOGY

Single-Cell-Resolution Imaging of the Impact of Notch Signaling and Mitosis on Segmentation Clock Dynamics

(2012) Emilie A. Delaune et al.   DEVELOPMENTAL CELL

Scaling of embryonic patterning based on phase-gradient encoding

(2012) Volker M. Lauschke et al.   NATURE

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Collective Modes of Coupled Phase Oscillators with Delayed Coupling

(2012) Saúl Ares et al.   PHYSICAL REVIEW LETTERS

The Synchrony and Cyclicity of Developmental Events

(2012) Y. Saga   Cold Spring Harbor Perspectives in Biology

Accelerating the Tempo of the Segmentation Clock by Reducing the Number of Introns in the Hes7 Gene

(2012) Yukiko Harima et al.   Cell Reports

Evolutionary plasticity of segmentation clock networks

(2011) A. J. Krol et al.   DEVELOPMENT

Size-normalized robustness of Dpp gradient in Drosophila wing imaginal disc

(2011) Arthur Lander et al.   Journal of Mechanics of Materials and Structures

Development of an optimized backbone of FRET biosensors for kinases and GTPases

(2011) Naoki Komatsu et al.   MOLECULAR BIOLOGY OF THE CELL

The period of the somite segmentation clock is sensitive to Notch activity

(2011) Woong Kim et al.   MOLECULAR BIOLOGY OF THE CELL

Def6 Is Required for Convergent Extension Movements during Zebrafish Gastrulation Downstream of Wnt5b Signaling

(2011) Katerina Goudevenou et al.   PLoS One

Segment Number and Axial Identity in a Segmentation Clock Period Mutant

(2010) Christian Schröter et al.   CURRENT BIOLOGY

Intercellular Coupling Regulates the Period of the Segmentation Clock

(2010) Leah Herrgen et al.   CURRENT BIOLOGY

Analysis of Ripply1/2-deficient mouse embryos reveals a mechanism underlying the rostro-caudal patterning within a somite

(2010) Jun Takahashi et al.   DEVELOPMENTAL BIOLOGY

Scaling of morphogen gradients by an expansion-repression integral feedback control

(2010) D. Ben-Zvi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Traveling wave formation in vertebrate segmentation

(2009) Koichiro Uriu et al.   JOURNAL OF THEORETICAL BIOLOGY

Shape and function of the Bicoid morphogen gradient in dipteran species with different sized embryos

(2008) Thomas Gregor et al.   DEVELOPMENTAL BIOLOGY

Dynamics of zebrafish somitogenesis

(2008) Christian Schröter et al.   DEVELOPMENTAL DYNAMICS

Delayed coupling theory of vertebrate segmentation

(2008) Luis G. Morelli et al.   HFSP Journal

Control of segment number in vertebrate embryos

(2008) Céline Gomez et al.   NATURE

Notch Signalling Synchronizes the Zebrafish Segmentation Clock but Is Not Needed To Create Somite Boundaries

(2008) Ertuğrul M. Özbudak et al.   PLoS Genetics