An integrative omics perspective for the analysis of chemical signals in ecological interactions

Discovering and linking public omics data sets using the Omics Discovery Index

(2017) Yasset Perez-Riverol et al.   NATURE BIOTECHNOLOGY

Global chemical analysis of biology by mass spectrometry

(2017) Alexander A. Aksenov et al.   Nature Reviews Chemistry

Characterisation of urinary WFDC12 in small nocturnal basal primates, mouse lemurs (Microcebus spp.)

(2017) Jennifer Unsworth et al.   Scientific Reports

A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome

(2016) Laurence Ettwiller et al.   BMC GENOMICS

Sequestration of Dimethylsulfoniopropionate (DMSP) and Acrylate from the Green Alga Ulva Spp. by the Sea Hare Aplysia juliana

(2016) Michiya Kamio et al.   JOURNAL OF CHEMICAL ECOLOGY

Sperm chemotaxis promotes individual fertilization success in sea urchins

(2016) Yasmeen H. Hussain et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Fragmentation reactions using electrospray ionization mass spectrometry: an important tool for the structural elucidation and characterization of synthetic and natural products

(2016) Daniel P. Demarque et al.   NATURAL PRODUCT REPORTS

Signaling in the Rhizosphere

(2016) Vittorio Venturi et al.   TRENDS IN PLANT SCIENCE

Multi-omic data integration enables discovery of hidden biological regularities

(2016) Ali Ebrahim et al.   Nature Communications

Current approaches and challenges for the metabolite profiling of complex natural extracts

(2015) Jean-Luc Wolfender et al.   JOURNAL OF CHROMATOGRAPHY A

Protein pheromone expression levels predict and respond to the formation of social dominance networks

(2015) A. C. Nelson et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Animals in a bacterial world: opportunities for chemical ecology

(2015) Alexandra M. Cantley et al.   NATURAL PRODUCT REPORTS

Metabolomics in chemical ecology

(2015) Constanze Kuhlisch et al.   NATURAL PRODUCT REPORTS

Third generation sequencing: technology and its potential impact on evolutionary biodiversity research

(2015) Christoph Bleidorn   SYSTEMATICS AND BIODIVERSITY

Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

(2015) Seth R. Bordenstein et al.   PLOS BIOLOGY

Top Down proteomics: Facts and perspectives

(2014) Adam D. Catherman et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Comparative genomics and transcriptomics in ants provide new insights into the evolution and function of odorant binding and chemosensory proteins

(2014) Sean K McKenzie et al.   BMC GENOMICS

Murine Pheromone Proteins Constitute a Context-Dependent Combinatorial Code Governing Multiple Social Behaviors

(2014) Angeldeep W. Kaur et al.   CELL

Comparative Transcriptomics of Convergent Evolution: Different Genes but Conserved Pathways Underlie Caste Phenotypes across Lineages of Eusocial Insects

(2014) Ali J. Berens et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mass spectrometry in plant metabolomics strategies: from analytical platforms to data acquisition and processing

(2014) Madeleine Ernst et al.   NATURAL PRODUCT REPORTS

Metabolomics and proteomics reveal impacts of chemically mediated competition on marine plankton

(2014) K. L. Poulson-Ellestad et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Protein Analysis by Shotgun/Bottom-up Proteomics

(2013) Yaoyang Zhang et al.   CHEMICAL REVIEWS

Imaging Mass Spectrometry of a Coral Microbe Interaction with Fungi

(2013) Wilna J. Moree et al.   JOURNAL OF CHEMICAL ECOLOGY

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Symbiotic bacteria appear to mediate hyena social odors

(2013) K. R. Theis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Animals in a bacterial world, a new imperative for the life sciences

(2013) Margaret McFall-Ngai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-Cell Metabolomics: Analytical and Biological Perspectives

(2013) R. Zenobi   SCIENCE

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Plant Volatiles Induced by Herbivore Egg Deposition Affect Insects of Different Trophic Levels

(2012) Nina E. Fatouros et al.   PLoS One

Mapping intact protein isoforms in discovery mode using top-down proteomics

(2011) John C. Tran et al.   NATURE

Next-generation transcriptome assembly

(2011) Jeffrey A. Martin et al.   NATURE REVIEWS GENETICS

High-throughput microfluidic single-cell RT-qPCR

(2011) A. K. White et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The evolutionary context for herbivore-induced plant volatiles: beyond the ‘cry for help’

(2010) Marcel Dicke et al.   TRENDS IN PLANT SCIENCE

Tools for exploring the proteomosphere

(2009) Andrej Shevchenko et al.   Journal of Proteomics

An analysis of the contents of the anal scent pockets of Herpestes auropunctatus (Carnivora: Viverridae)

(2009) MartynL. Gorman et al.   JOURNAL OF ZOOLOGY

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Chemical ecology in retrospect and prospect

(2008) J. Meinwald et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proteomics Reveals Novel Drosophila Seminal Fluid Proteins Transferred at Mating

(2008) Geoffrey D Findlay et al.   PLOS BIOLOGY