Species-rich networks and eco-evolutionary synthesis at the metacommunity level

Network modules and hubs in plant-root fungal biomes

(2016) Hirokazu Toju et al.   Journal of the Royal Society Interface

Tracking and forecasting ecosystem interactions in real time

(2016) Ethan R. Deyle et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A method for simultaneous measurement of soil bacterial abundances and community composition via 16S rRNA gene sequencing

(2016) Wenke Smets et al.   SOIL BIOLOGY & BIOCHEMISTRY

Molecular signals required for the establishment and maintenance of ectomycorrhizal symbioses

(2015) Kevin Garcia et al.   NEW PHYTOLOGIST

High-throughput DNA barcoding for ecological network studies

(2015) Hirokazu Toju   POPULATION ECOLOGY

Why infectious disease research needs community ecology

(2015) P. T. J. Johnson et al.   SCIENCE

So Many Variables: Joint Modeling in Community Ecology

(2015) David I. Warton et al.   TRENDS IN ECOLOGY & EVOLUTION

Microbial communities on flower surfaces act as signatures of pollinator visitation

(2015) Masayuki Ushio et al.   Scientific Reports

Sparse and Compositionally Robust Inference of Microbial Ecological Networks

(2015) Zachary D. Kurtz et al.   PLoS Computational Biology

Specialization for resistance in wild host-pathogen interaction networks

(2015) Luke G. Barrett et al.   Frontiers in Plant Science

Below-ground plant-fungus network topology is not congruent with above-ground plant-animal network topology

(2015) H. Toju et al.   Science Advances

Diet disparity among sympatric herbivorous cichlids in the same ecomorphs in Lake Tanganyika: amplicon pyrosequences on algal farms and stomach contents

(2014) Hiroki Hata et al.   BMC BIOLOGY

Determinism of bacterial metacommunity dynamics in the southern East China Sea varies depending on hydrography

(2014) Yi-Chun Yeh et al.   ECOGRAPHY

Phytoplankton functional group dynamics explain species abundance distribution in a directionally changing environment

(2014) Cheng-Han Tsai et al.   ECOLOGY

Host ecotype generates evolutionary and epidemiological divergence across a pathogen metapopulation

(2014) A.-L. Laine et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ecological and evolutionary effects of fragmentation on infectious disease dynamics

(2014) J. Jousimo et al.   SCIENCE

Applying evolutionary biology to address global challenges

(2014) S. P. Carroll et al.   SCIENCE

Assembly of complex plant–fungus networks

(2014) Hirokazu Toju et al.   Nature Communications

Spatial eco-evolutionary feedback in plant-pathogen interactions

(2013) Ayco J. M. Tack et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Rapid evolution: from genes to communities, and back again?

(2013) Stephen P. Ellner   FUNCTIONAL ECOLOGY

Key questions in the genetics and genomics of eco-evolutionary dynamics

(2013) A P Hendry   HEREDITY

Deciphering and Prediction of Transcriptome Dynamics under Fluctuating Field Conditions

(2012) Atsushi J. Nagano et al.   CELL

Extending the concept of keystone species to communities and ecosystems

(2012) Nicolas Mouquet et al.   ECOLOGY LETTERS

The dissimilarity of species interaction networks

(2012) Timothée Poisot et al.   ECOLOGY LETTERS

COEVOLUTION AND THE ARCHITECTURE OF MUTUALISTIC NETWORKS

(2012) Scott L. Nuismer et al.   EVOLUTION

Stability criteria for complex ecosystems

(2012) Stefano Allesina et al.   NATURE

Emerging fungal threats to animal, plant and ecosystem health

(2012) Matthew C. Fisher et al.   NATURE

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

Detecting Causality in Complex Ecosystems

(2012) G. Sugihara et al.   SCIENCE

Evolution and coevolution in mutualistic networks

(2011) Paulo R. Guimarães Jr et al.   ECOLOGY LETTERS

Does rapid evolution matter? Measuring the rate of contemporary evolution and its impacts on ecological dynamics

(2011) Stephen P. Ellner et al.   ECOLOGY LETTERS

Toward an integration of evolutionary biology and ecosystem science

(2011) Blake Matthews et al.   ECOLOGY LETTERS

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Empirical approaches to metacommunities: a review and comparison with theory

(2011) Jürg B. Logue et al.   TRENDS IN ECOLOGY & EVOLUTION

Synchrony and Stability of Food Webs in Metacommunities

(2010) Tarik C. Gouhier et al.   AMERICAN NATURALIST

Patterns of coevolution in the adaptive radiation of crossbills

(2010) Craig W. Benkman et al.   Annals of the New York Academy of Sciences

Metacommunity phylogenetics: separating the roles of environmental filters and historical biogeography

(2010) Mathew A. Leibold et al.   ECOLOGY LETTERS

Mutualisms in a changing world: an evolutionary perspective

(2010) E. Toby Kiers et al.   ECOLOGY LETTERS

Transfer entropy—a model-free measure of effective connectivity for the neurosciences

(2010) Raul Vicente et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Spatial variation in disease resistance: from molecules to metapopulations

(2010) Anna-Liisa Laine et al.   JOURNAL OF ECOLOGY

Mapping Change in Large Networks

(2010) Martin Rosvall et al.   PLoS One

Stochastic Community Assembly Causes Higher Biodiversity in More Productive Environments

(2010) J. M. Chase   SCIENCE

Stability of Ecological Communities and the Architecture of Mutualistic and Trophic Networks

(2010) E. Thebault et al.   SCIENCE

Source Populations Act as Coevolutionary Pacemakers in Experimental Selection Mosaics Containing Hotspots and Coldspots

(2009) Tom Vogwill et al.   AMERICAN NATURALIST

The Geographic Mosaic of Sex and the Red Queen

(2009) Kayla C. King et al.   CURRENT BIOLOGY

Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces

(2009) BRUCE E. DEAGLE et al.   MOLECULAR ECOLOGY

Eco-evolutionary feedbacks in community and ecosystem ecology: interactions between the ecological theatre and the evolutionary play

(2009) D. M. Post et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Eco-evolutionary dynamics

(2009) F. Pelletier et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Networks of spatial genetic variation across species

(2009) Miguel A. Fortuna et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Coevolution of Plants and Their Pathogens in Natural Habitats

(2009) J. J. Burdon et al.   SCIENCE

TEMPORAL DYNAMICS IN A POLLINATION NETWORK

(2008) Jens M. Olesen et al.   ECOLOGY

Diversity and productivity peak at intermediate dispersal rate in evolving metacommunities

(2008) P. A. Venail et al.   NATURE

The evolutionary ecology of metacommunities

(2008) M URBAN et al.   TRENDS IN ECOLOGY & EVOLUTION