Emergence of Resistance Mutations in Salmonella enterica Serovar Typhi Against Fluoroquinolones

Gatifloxacin versus ceftriaxone for uncomplicated enteric fever in Nepal: an open-label, two-centre, randomised controlled trial

(2016) Amit Arjyal et al.   LANCET INFECTIOUS DISEASES

An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid

(2016) Vanessa K. Wong et al.   Nature Communications

A genome-wide association study identifies a horizontally transferred bacterial surface adhesin gene associated with antimicrobial resistant strains

(2016) Masato Suzuki et al.   Scientific Reports

Antimicrobials Increase Travelers' Risk of Colonization by Extended-Spectrum Betalactamase-Producing Enterobacteriaceae

(2015) A. Kantele et al.   CLINICAL INFECTIOUS DISEASES

Typhoid fever

(2015) John Wain et al.   LANCET

Epistatic Interactions in the ArabinoseCis-Regulatory Element

(2015) Mato Lagator et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events

(2015) Vanessa K Wong et al.   NATURE GENETICS

Rapid Emergence of Multidrug Resistant, H58-Lineage Salmonella Typhi in Blantyre, Malawi

(2015) Nicholas A. Feasey et al.   PLoS Neglected Tropical Diseases

Performance of Etest and Disk Diffusion for Detection of Ciprofloxacin and Levofloxacin Resistance in Salmonella enterica

(2014) Eszter Deak et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Transient Darwinian selection in Salmonella enterica serovar Paratyphi A during 450 years of global spread of enteric fever

(2014) Z. Zhou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Burden of typhoid fever in low-income and middle-income countries: a systematic, literature-based update with risk-factor adjustment

(2014) Vittal Mogasale et al.   Lancet Global Health

The Type VI Secretion System Encoded in SPI-6 Plays a Role in Gastrointestinal Colonization and Systemic Spread of Salmonella enterica serovar Typhimurium in the Chicken

(2013) David Pezoa et al.   PLoS One

Genome-wide association study identifies vitamin B5 biosynthesis as a host specificity factor in Campylobacter

(2013) S. K. Sheppard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

(2012) D. C. Koboldt et al.   GENOME RESEARCH

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

Antimicrobial resistance trends in blood culture positive Salmonella Typhi isolates from Pondicherry, India, 2005–2009

(2011) G.A. Menezes et al.   CLINICAL MICROBIOLOGY AND INFECTION

The yicJI metabolic operon of Escherichia coli is involved in bacterial fitness

(2011) Maryline Répérant et al.   FEMS MICROBIOLOGY LETTERS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS