Potyvirus virion structure shows conserved protein fold and RNA binding site in ssRNA viruses

ICTV Virus Taxonomy Profile: Potyviridae

(2017) Stephen J Wylie et al.   JOURNAL OF GENERAL VIROLOGY

Helical reconstruction in RELION

(2017) Shaoda He et al.   JOURNAL OF STRUCTURAL BIOLOGY

The molecular basis for flexibility in the flexible filamentous plant viruses

(2015) Frank DiMaio et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

(2015) Nuala A. O'Leary et al.   NUCLEIC ACIDS RESEARCH

Origins and evolution of viruses of eukaryotes: The ultimate modularity

(2015) Eugene V. Koonin et al.   VIROLOGY

The molecular basis for flexibility in the flexible filamentous plant viruses

(2015) Frank DiMaio et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The near-atomic cryoEM structure of a flexible filamentous plant virus shows homology of its coat protein with nucleoproteins of animal viruses

(2015) Xabier Agirrezabala et al.   eLife

SPRING – An image processing package for single-particle based helical reconstruction from electron cryomicrographs

(2013) Ambroise Desfosses et al.   JOURNAL OF STRUCTURAL BIOLOGY

Quantifying the local resolution of cryo-EM density maps

(2013) Alp Kucukelbir et al.   NATURE METHODS

Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM

(2013) Xueming Li et al.   NATURE METHODS

Structural basis for encapsidation of genomic RNA by La Crosse Orthobunyavirus nucleoprotein

(2013) J. Reguera et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Monomeric Nucleoprotein of Influenza A Virus

(2013) Sylvie Chenavas et al.   PLoS Pathogens

Bluues server: electrostatic properties of wild-type and mutated protein structures

(2012) I. Walsh et al.   BIOINFORMATICS

Bluues: a program for the analysis of the electrostatic properties of proteins based on generalized Born radii

(2012) Federico Fogolari et al.   BMC BIOINFORMATICS

Crystal Structure of the Coat Protein of the Flexible Filamentous Papaya Mosaic Virus

(2012) Shaoqing Yang et al.   JOURNAL OF MOLECULAR BIOLOGY

Phleboviruses encapsidate their genomes by sequestering RNA bases

(2012) D. D. Raymond et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Structure of Native Influenza Virion Ribonucleoproteins

(2012) R. Arranz et al.   SCIENCE

A common structure for the potexviruses

(2012) Amy Kendall et al.   VIROLOGY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

PHENIX: a comprehensive Python-based system for macromolecular structure solution

(2010) Paul D. Adams et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Quantitative analysis of cryo-EM density map segmentation by watershed and scale-space filtering, and fitting of structures by alignment to regions

(2010) Grigore D. Pintilie et al.   JOURNAL OF STRUCTURAL BIOLOGY

Dali server: conservation mapping in 3D

(2010) Liisa Holm et al.   NUCLEIC ACIDS RESEARCH

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Electron Cryo-Microscopy and Single-Particle Averaging of Rift Valley Fever Virus: Evidence for GN-GC Glycoprotein Heterodimers

(2009) J. T. Huiskonen et al.   JOURNAL OF VIROLOGY

Structure of Flexible Filamentous Plant Viruses

(2008) A. Kendall et al.   JOURNAL OF VIROLOGY

Three-Dimensional Organization of Rift Valley Fever Virus Revealed by Cryoelectron Tomography

(2008) A. N. Freiberg et al.   JOURNAL OF VIROLOGY