Small non-coding RNA transcriptome of the NCI-60 cell line panel

Developmental transcription factor NFIB is a putative target of oncofetal miRNAs and is associated with tumour aggressiveness in lung adenocarcinoma

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Piwi-interacting RNAs in cancer: emerging functions and clinical utility

(2016) Kevin W. Ng et al.   Molecular Cancer

The Ensembl gene annotation system

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Oasis: online analysis of small RNA deep sequencing data

(2015) Vincenzo Capece et al.   BIOINFORMATICS

Non-Coding RNAs in Saliva: Emerging Biomarkers for Molecular Diagnostics

(2015) Blanca Majem et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Large-scale profiling of microRNAs for The Cancer Genome Atlas

(2015) Andy Chu et al.   NUCLEIC ACIDS RESEARCH

Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs

(2015) Eric Londin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Unique somatic and malignant expression patterns implicate PIWI-interacting RNAs in cancer-type specific biology

(2015) Victor D. Martinez et al.   Scientific Reports

MicroRNAs in cancer: biomarkers, functions and therapy

(2014) Josie Hayes et al.   TRENDS IN MOLECULAR MEDICINE

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Genomics of Drug Sensitivity in Cancer (GDSC): a resource for therapeutic biomarker discovery in cancer cells

(2012) Wanjuan Yang et al.   NUCLEIC ACIDS RESEARCH

Gene Expression Profiles of the NCI-60 Human Tumor Cell Lines Define Molecular Interaction Networks Governing Cell Migration Processes

(2012) Kurt W. Kohn et al.   PLoS One

Expression of MicroRNAs in the NCI-60 Cancer Cell-Lines

(2012) Santosh K. Patnaik et al.   PLoS One

MicroRNA Gene Dosage Alterations and Drug Response in Lung Cancer

(2011) Katey S. S. Enfield et al.   JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY

Global microRNA Analysis of the NCI-60 Cancer Cell Panel

(2011) R. Sokilde et al.   MOLECULAR CANCER THERAPEUTICS

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

(2011) Marc R. Friedländer et al.   NUCLEIC ACIDS RESEARCH

DNA fingerprinting of the NCI-60 cell line panel

(2009) P. L. Lorenzi et al.   MOLECULAR CANCER THERAPEUTICS

Discovering microRNAs from deep sequencing data using miRDeep

(2008) Marc R Friedländer et al.   NATURE BIOTECHNOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS