Novel soil-inhabiting clades fill gaps in the fungal tree of life

Discovery of dark matter fungi in aquatic ecosystems demands a reappraisal of the phylogeny and ecology of zoosporic fungi

(2016) Hans-Peter Grossart et al.   Fungal Ecology

The invisible dimension of fungal diversity

(2016) David Hibbett   SCIENCE

Digital identifiers for fungal species

(2016) U. Kõljalg et al.   SCIENCE

Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes

(2016) Kevin V. Solomon et al.   SCIENCE

Genomics and metagenomics technologies to recover ribosomal DNA and single-copy genes from old fruit-body and ectomycorrhiza specimens

(2016) Leho Tedersoo et al.   MycoKeys

Top 50 most wanted fungi

(2016) R. Henrik Nilsson et al.   MycoKeys

Tales from the crypt: genome mining from fungarium specimens improves resolution of the mushroom tree of life

(2015) Bryn T. M. Dentinger et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Microbiomes of Streptophyte Algae and Bryophytes Suggest That a Functional Suite of Microbiota Fostered Plant Colonization of Land

(2015) J. J. Knack et al.   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Molecular diversity and distribution of marine fungi across 130 European environmental samples

(2015) Thomas A. Richards et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Identification of Habitat-Specific Biomes of Aquatic Fungal Communities Using a Comprehensive Nearly Full-Length 18S rRNA Dataset Enriched with Contextual Data

(2015) Katrin Panzer et al.   PLoS One

Evolutionary histories of soil fungi are reflected in their large-scale biogeography

(2014) Kathleen K. Treseder et al.   ECOLOGY LETTERS

Contrasting soil fungal community responses to experimental nitrogen addition using the large subunit rRNA taxonomic marker and cellobiohydrolase I functional marker

(2014) Rebecca C. Mueller et al.   MOLECULAR ECOLOGY

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Disentangling global soil fungal diversity

(2014) D. A. Wardle et al.   SCIENCE

The others: our biased perspective of eukaryotic genomes

(2014) Javier del Campo et al.   TRENDS IN ECOLOGY & EVOLUTION

Morphology, phylogeny, and ecology of the aphelids (Aphelidea, Opisthokonta) and proposal for the new superphylum Opisthosporidia

(2014) Sergey A. Karpov et al.   Frontiers in Microbiology

Shared Signatures of Parasitism and Phylogenomics Unite Cryptomycota and Microsporidia

(2013) Timothy Y. James et al.   CURRENT BIOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Temporal variation of the small eukaryotic community in two freshwater lakes: emphasis on zoosporic fungi

(2012) E Lefèvre et al.   AQUATIC MICROBIAL ECOLOGY

RAxML-Light: a tool for computing terabyte phylogenies

(2012) A. Stamatakis et al.   BIOINFORMATICS

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Fungi: 1, 2, 3 … 5.1 million species?

(2011) Meredith Blackwell   AMERICAN JOURNAL OF BOTANY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

A multigene phylogeny of Olpidium and its implications for early fungal evolution

(2011) Satoshi Sekimoto et al.   BMC EVOLUTIONARY BIOLOGY

Discovery of novel intermediate forms redefines the fungal tree of life

(2011) Meredith D. M. Jones et al.   NATURE

Single-Cell Genomics Reveals Organismal Interactions in Uncultivated Marine Protists

(2011) H. S. Yoon et al.   SCIENCE

Archaeorhizomycetes: Unearthing an Ancient Class of Ubiquitous Soil Fungi

(2011) A. Rosling et al.   SCIENCE

Fungal Propagules and DNA in Feces of Two Detritus-Feeding Amphipods

(2010) Kandikere Ramaiah Sridhar et al.   MICROBIAL ECOLOGY

The Fungi

(2009) Jason E. Stajich et al.   CURRENT BIOLOGY