Multi-locus and long amplicon sequencing approach to study microbial diversity at species level using the MinION™ portable nanopore sequencer
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Multi-locus and long amplicon sequencing approach to study microbial diversity at species level using the MinION™ portable nanopore sequencer
Authors
Keywords
-
Journal
GigaScience
Volume 6, Issue 7, Pages 1-12
Publisher
Oxford University Press (OUP)
Online
2017-06-12
DOI
10.1093/gigascience/gix043
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers
- (2016) Phillip R. Myer et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Analysis of the mouse gut microbiome using full-length 16S rRNA amplicon sequencing
- (2016) Jongoh Shin et al. Scientific Reports
- Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system
- (2016) Patrick D. Schloss et al. PeerJ
- INC-Seq: accurate single molecule reads using nanopore sequencing
- (2016) Chenhao Li et al. GigaScience
- Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer
- (2016) Alfonso Benítez-Páez et al. GigaScience
- Early insights into the potential of the Oxford Nanopore MinION for the detection of antimicrobial resistance genes
- (2015) Kim Judge et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- A complete bacterial genome assembled de novo using only nanopore sequencing data
- (2015) Nicholas J Loman et al. NATURE METHODS
- Scaffolding of a bacterial genome using MinION nanopore sequencing
- (2015) E. Karlsson et al. Scientific Reports
- Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis
- (2015) Alexander L. Greninger et al. Genome Medicine
- A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data
- (2015) Judith Risse et al. GigaScience
- Bacterial and viral identification and differentiation by amplicon sequencing on the MinION nanopore sequencer
- (2015) Andy Kilianski et al. GigaScience
- SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
- (2012) Elmar Pruesse et al. BIOINFORMATICS
- Parameters for accurate genome alignment
- (2012) Martin C Frith et al. BMC BIOINFORMATICS
- UCHIME improves sensitivity and speed of chimera detection
- (2011) Robert C. Edgar et al. BIOINFORMATICS
- FLASH: fast length adjustment of short reads to improve genome assemblies
- (2011) T. Magoc et al. BIOINFORMATICS
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Analysis of 16Sâ23S rRNA gene internal transcribed spacer ofVibrio anguillarumandVibrio ordaliistrains isolated from fish
- (2009) Jorge Fernández et al. FEMS MICROBIOLOGY LETTERS
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More