Tandem duplication of two tRNA genes in the mitochondrial genome of Tagiades vajuna (Lepidoptera: Hesperiidae)

Mitochondrial genome of the sweet potato hornworm, Agrius convolvuli (Lepidoptera: Sphingidae), and comparison with other Lepidoptera species

(2017) Li-Shang Dai et al.   GENOME

Sequencing, characterization and phylogenomics of the complete mitochondrial genome of Dactylogyrus lamellatus (Monogenea: Dactylogyridae)

(2017) D. Zhang et al.   JOURNAL OF HELMINTHOLOGY

The complete mitochondrial DNA of three monozoic tapeworms in the Caryophyllidea: a mitogenomic perspective on the phylogeny of eucestodes

(2017) Wen X. Li et al.   Parasites & Vectors

The complete mitogenome of Euschemon rafflesia (Lepidoptera: Hesperiidae)

(2017) Jing Zhang et al.   Mitochondrial DNA Part B-Resources

Mitochondrial genome characterization of Tecia solanivora (Lepidoptera: Gelechiidae) and its phylogenetic relationship with other lepidopteran insects

(2016) Viviana Ramírez-Ríos et al.   GENE

Capturing the Phylogeny of Holometabola with Mitochondrial Genome Data and Bayesian Site-Heterogeneous Mixture Models

(2016) Fan Song et al.   Genome Biology and Evolution

Mitochondrial genomes of praying mantises (Dictyoptera, Mantodea): rearrangement, duplication, and reassignment of tRNA genes

(2016) Fei Ye et al.   Scientific Reports

A mitochondrial genome phylogeny of owlet moths (Lepidoptera: Noctuoidea), and examination of the utility of mitochondrial genomes for lepidopteran phylogenetics

(2015) Xiushuai Yang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Large gene overlaps and tRNA processing in the compact mitochondrial genome of the crustaceanArmadillidium vulgare

(2015) Vincent Doublet et al.   RNA Biology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Complete mitochondrial genomes of five skippers (Lepidoptera: Hesperiidae) and phylogenetic reconstruction of Lepidoptera

(2014) Min Jee Kim et al.   GENE

Probabilistic Reconstruction of Ancestral Gene Orders with Insertions and Deletions

(2014) Fei Hu et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

The complete mitochondrial genome ofParara guttata(Lepidoptera: Hesperiidae)

(2014) Lili Shao et al.   Mitochondrial DNA

Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny

(2013) Stephen L. Cameron   Annual Review of Entomology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Description of new mitochondrial genomes (Spodoptera litura, Noctuoidea and Cnaphalocrocis medinalis, Pyraloidea) and phylogenetic reconstruction of Lepidoptera with the comment on optimization schemes

(2013) Xinlong Wan et al.   MOLECULAR BIOLOGY REPORTS

A comparative analysis of complete mitochondrial genomes among Hexapoda

(2013) Sabrina Simon et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach

(2013) Christoph Hahn et al.   NUCLEIC ACIDS RESEARCH

Butterfly morphology in a molecular age – Does it still matter in butterfly systematics?

(2012) Thomas J. Simonsen et al.   ARTHROPOD STRUCTURE & DEVELOPMENT

The Complete Mitochondrial Genome ofCtenoptilum vasava(Lepidoptera: Hesperiidae: Pyrginae) and Its Phylogenetic Implication

(2012) Jiasheng Hao et al.   COMPARATIVE AND FUNCTIONAL GENOMICS

Beyond barcoding: A mitochondrial genomics approach to molecular phylogenetics and diagnostics of blowflies (Diptera: Calliphoridae)

(2012) Leigh A. Nelson et al.   GENE

The complete mitochondrial genome of the fall webworm, Hyphantria cunea (Lepidoptera: Arctiidae)

(2012) Fang Liao et al.   International Journal of Biological Sciences

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

A mitochondrial genome phylogeny of termites (Blattodea: Termitoidae): Robust support for interfamilial relationships and molecular synapomorphies define major clades

(2012) Stephen L. Cameron et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

MITOS: Improved de novo metazoan mitochondrial genome annotation

(2012) Matthias Bernt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Reconstructing intraordinal relationships in Lepidoptera using mitochondrial genome data with the description of two newly sequenced lycaenids, Spindasis takanonis and Protantigius superans (Lepidoptera: Lycaenidae)

(2011) Min Jee Kim et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

raxmlGUI: a graphical front-end for RAxML

(2011) Daniele Silvestro et al.   ORGANISMS DIVERSITY & EVOLUTION

The complete mitochondrial genome of the yellow coaster, Acraea issoria (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini): sequence, gene organization and a unique tRNA translocation event

(2009) Jing Hu et al.   MOLECULAR BIOLOGY REPORTS

Complete nucleotide sequence and organization of the mitogenome of the red-spotted apollo butterfly, Parnassius bremeri (Lepidoptera: Papilionidae) and comparison with other lepidopteran insects

(2009) Man Il Kim et al.   MOLECULES AND CELLS

Nonstationary Evolution and Compositional Heterogeneity in Beetle Mitochondrial Phylogenomics

(2009) Nathan C. Sheffield et al.   SYSTEMATIC BIOLOGY

Revised classification of the family Hesperiidae (Lepidoptera: Hesperioidea) based on combined molecular and morphological data

(2009) ANDREW D. WARREN et al.   SYSTEMATIC ENTOMOLOGY

Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species

(2008) C Gissi et al.   HEREDITY

A Comparative Analysis of Mitochondrial Genomes in Coleoptera (Arthropoda: Insecta) and Genome Descriptions of Six New Beetles

(2008) N. C. Sheffield et al.   MOLECULAR BIOLOGY AND EVOLUTION

The complete mitochondrial genome of the tobacco hornworm, Manduca sexta, (Insecta: Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths

(2007) Stephen L. Cameron et al.   GENE