Sorghum and wheat differentially affect caecal microbiota and associated performance characteristics of meat chickens

Calypso: a user-friendly web-server for mining and visualizing microbiome–environment interactions

(2016) Martha Zakrzewski et al.   BIOINFORMATICS

Diet–microbiota interactions as moderators of human metabolism

(2016) Justin L. Sonnenburg et al.   NATURE

Bacteria within the Gastrointestinal Tract Microbiota Correlated with Improved Growth and Feed Conversion: Challenges Presented for the Identification of Performance Enhancing Probiotic Bacteria

(2016) Dragana Stanley et al.   Frontiers in Microbiology

A combination of xylanase, amylase and protease influences growth performance, nutrient utilisation, starch and protein digestive dynamics in broiler chickens offered maize-, sorghum- and wheat-based diets

(2015) S. Y. Liu et al.   Animal Production Science

Impact of Selection for Digestive Efficiency on Microbiota Composition in the Chicken

(2015) Sandrine Mignon-Grasteau et al.   PLoS One

Effects of phytase supplementation on growth performance, nutrient utilization and digestive dynamics of starch and protein in broiler chickens offered maize-, sorghum- and wheat-based diets

(2014) S.Y. Liu et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

Analysis of the intestinal bacterial microbiota in maize- or sorghum-fed broiler chickens using real-time PCR

(2014) R. Lunedo et al.   BRITISH POULTRY SCIENCE

Strategies to enhance the performance of pigs and poultry on sorghum-based diets

(2013) Sonia Y. Liu et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

Intestinal microbiota: A source of novel biomarkers in inflammatory bowel diseases?

(2013) David Berry et al.   BEST PRACTICE & RESEARCH IN CLINICAL GASTROENTEROLOGY

A genomic update on clostridial phylogeny: Gram-negative spore formers and other misplaced clostridia

(2013) Natalya Yutin et al.   ENVIRONMENTAL MICROBIOLOGY

Intestinal microbiota and metabolites--Implications for broiler chicken health and performance1

(2013) T. Rinttila et al.   JOURNAL OF APPLIED POULTRY RESEARCH

The effects of coarse ground corn, whole sorghum, and a prebiotic on growth performance, nutrient digestibility, and cecal microbial populations in broilers fed diets with and without corn distillers dried grains with solubles

(2013) C. Jacobs et al.   POULTRY SCIENCE

Identification of chicken intestinal microbiota correlated with the efficiency of energy extraction from feed

(2013) Dragana Stanley et al.   VETERINARY MICROBIOLOGY

Identification of differential duodenal gene expression levels and microbiota abundance correlated with differences in energy utilisation in chickens

(2013) Barbara M. Konsak et al.   Animal Production Science

Intestinal microbiota associated with differential feed conversion efficiency in chickens

(2012) Dragana Stanley et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Effect of pre-weaning concentrate supplementation on peripheral distribution of leukocytes, functional activity of neutrophils, acute phase protein and behavioural responses of abruptly weaned and housed beef calves

(2012) Eilish M Lynch et al.   BMC Veterinary Research

High through put 16S rRNA gene-based pyrosequencing analysis of the fecal microbiota of high FCR and low FCR broiler growers

(2012) K. M. Singh et al.   MOLECULAR BIOLOGY REPORTS

Functional interactions between the gut microbiota and host metabolism

(2012) Valentina Tremaroli et al.   NATURE

Fast, accurate error-correction of amplicon pyrosequences using Acacia

(2012) Lauren Bragg et al.   NATURE METHODS

Lactobacillus reuteri Prevents Diet-Induced Obesity, but not Atherosclerosis, in a Strain Dependent Fashion in Apoe−/− Mice

(2012) Frida Fåk et al.   PLoS One

Identification and Characterization of Potential Performance-Related Gut Microbiotas in Broiler Chickens across Various Feeding Trials

(2011) Valeria A. Torok et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Enterococcus cecoruminfections in broiler breeders and their offspring: molecular epidemiology

(2011) M.J. Kense et al.   AVIAN PATHOLOGY

Characterization of fecal microbial communities in patients with liver cirrhosis

(2011) Yanfei Chen et al.   HEPATOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Selected microbial groups and short-chain fatty acids profile in a simulated chicken cecum supplemented with two strains of Lactobacillus

(2010) A. Meimandipour et al.   POULTRY SCIENCE

Detection of Catabacter hongkongensis in polluted European water samples

(2009) Francesc Codony et al.   Journal of Zhejiang University-SCIENCE B

Intestinal function and gut microflora of broiler chickens as influenced by cereal grains and microbial enzyme supplementation

(2008) M. D. Shakouri et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Pyrobayes: an improved base caller for SNP discovery in pyrosequences

(2008) Aaron R Quinlan et al.   NATURE METHODS