The complete chloroplast genome sequence of strawberry (Fragaria  × ananassa Duch.) and comparison with related species of Rosaceae

Diversification of Rosaceae since the Late Cretaceous based on plastid phylogenomics

(2017) Shu-Dong Zhang et al.   NEW PHYTOLOGIST

RdreB1BI enhances drought tolerance by activating AQP-related genes in transgenic strawberry

(2017) Xianbin Gu et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The complete chloroplast genome sequence of the white strawberry Fragaria pentaphylla

(2017) Li-jun Bai et al.   Conservation Genetics Resources

Genotyping-by-sequencing enables linkage mapping in three octoploid cultivated strawberry families

(2017) Kelly J. Vining et al.   PeerJ

The complete chloroplast genome sequence of Morus cathayana and Morus multicaulis, and comparative analysis within genus Morus L

(2017) Wei Qing Kong et al.   PeerJ

Evolution of Rosaceae Fruit Types Based on Nuclear Phylogeny in the Context of Geological Times and Genome Duplication

(2016) Yezi Xiang et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genome of black raspberry (Rubus occidentalis)

(2016) Robert VanBuren et al.   PLANT JOURNAL

The Complete Chloroplast Genome of Ye-Xing-Ba (Scrophularia dentata; Scrophulariaceae), an Alpine Tibetan Herb

(2016) Lianghong Ni et al.   PLoS One

Characterization of the complete chloroplast genome of the Chinese crabapple Malus prunifolia (Rosales: Rosaceae: Maloideae)

(2016) Lu Bao et al.   Conservation Genetics Resources

Complete Chloroplast Genome of Nicotiana otophora and its Comparison with Related Species

(2016) Sajjad Asaf et al.   Frontiers in Plant Science

Complete plastid genome of Eriobotrya japonica (Thunb.) Lindl and comparative analysis in Rosaceae

(2016) Liqun Shen et al.   SpringerPlus

Intraspecific and heteroplasmic variations, gene losses and inversions in the chloroplast genome of Astragalus membranaceus

(2016) Wanjun Lei et al.   Scientific Reports

Comparison of nuclear, plastid, and mitochondrial phylogenies and the origin of wild octoploid strawberry species

(2015) Rajanikanth Govindarajulu et al.   AMERICAN JOURNAL OF BOTANY

Transcription factors and anthocyanin genes related to low-temperature tolerance in rd29A:RdreB1BI transgenic strawberry

(2015) Xianbin Gu et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Complete Chloroplast Genome Sequence of Tartary Buckwheat (Fagopyrum tataricum) and Comparative Analysis with Common Buckwheat (F. esculentum)

(2015) Kwang-Soo Cho et al.   PLoS One

The First Complete Chloroplast Genome Sequences in Actinidiaceae: Genome Structure and Comparative Analysis

(2015) Xiaohong Yao et al.   PLoS One

The complete chloroplast genome sequence of Taxus chinensis var. mairei (Taxaceae): loss of an inverted repeat region and comparative analysis with related species

(2014) Yanzhen Zhang et al.   GENE

An Improved Protocol for Intact Chloroplasts and cpDNA Isolation in Conifers

(2014) Leila do Nascimento Vieira et al.   PLoS One

Bioclimatic, ecological, and phenotypic intermediacy and high genetic admixture in a natural hybrid of octoploid strawberries

(2013) Isabella Salamone et al.   AMERICAN JOURNAL OF BOTANY

Dissection of the Octoploid Strawberry Genome by Deep Sequencing of the Genomes of Fragaria Species

(2013) H. Hirakawa et al.   DNA RESEARCH

The complete chloroplast genome sequence of Mahonia bealei (Berberidaceae) reveals a significant expansion of the inverted repeat and phylogenetic relationship with other angiosperms

(2013) Ji Ma et al.   GENE

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

(2013) Ignazio Verde et al.   NATURE GENETICS

Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach

(2013) Christoph Hahn et al.   NUCLEIC ACIDS RESEARCH

Plastid Genome Sequence of a Wild Woody Oil Species, Prinsepia utilis, Provides Insights into Evolutionary and Mutational Patterns of Rosaceae Chloroplast Genomes

(2013) Shuo Wang et al.   PLoS One

Complete Sequencing of Five Araliaceae Chloroplast Genomes and the Phylogenetic Implications

(2013) Rong Li et al.   PLoS One

Targeted Sequence Capture Provides Insight into Genome Structure and Genetics of Male Sterility in a Gynodioecious Diploid Strawberry, Fragaria vesca ssp. bracteata (Rosaceae)

(2013) Jacob A. Tennessen et al.   G3-Genes Genomes Genetics

Polymorphic chloroplast microsatellite loci in Nelumbo (Nelumbonaceae)

(2012) J. Xue et al.   AMERICAN JOURNAL OF BOTANY

The genome of the pear (Pyrus bretschneideri Rehd.)

(2012) J. Wu et al.   GENOME RESEARCH

Expanded phylogenetic and dating analyses of the apples and their relatives (Pyreae, Rosaceae)

(2012) Eugenia Y.Y. Lo et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing

(2012) Wambui Njuguna et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Complete sequence of the chloroplast genome from pear (Pyrus pyrifolia): genome structure and comparative analysis

(2012) Shingo Terakami et al.   Tree Genetics & Genomes

The genome of Prunus mume

(2012) Qixiang Zhang et al.   Nature Communications

Complete chloroplast genome sequence of Magnolia kwangsiensis (Magnoliaceae): implication for DNA barcoding and population genetics

(2011) Dai-Yong Kuang et al.   GENOME

Complete Plastid Genome Sequences of Three Rosids (Castanea, Prunus, Theobroma): Evidence for At Least Two Independent Transfers of rpl22 to the Nucleus

(2010) R. K. Jansen et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genome of woodland strawberry (Fragaria vesca)

(2010) Vladimir Shulaev et al.   NATURE GENETICS

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

Decaploidy in Fragaria iturupensis (Rosaceae)

(2009) Kim E. Hummer et al.   AMERICAN JOURNAL OF BOTANY

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Tracking the evolutionary history of polyploidy in Fragaria L. (strawberry): New insights from phylogenetic analyses of low-copy nuclear genes

(2009) M. Rousseau-Gueutin et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Dynamics and evolution of the inverted repeat-large single copy junctions in the chloroplast genomes of monocots

(2008) Rui-Jiang Wang et al.   BMC EVOLUTIONARY BIOLOGY

MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences

(2008) S. Kumar et al.   BRIEFINGS IN BIOINFORMATICS

The complete nucleotide sequence of the cassava (Manihot esculenta) chloroplast genome and the evolution of atpF in Malpighiales: RNA editing and multiple losses of a group II intron

(2008) Henry Daniell et al.   THEORETICAL AND APPLIED GENETICS