De Novo Assembly and Analysis of Tartary Buckwheat (Fagopyrum tataricum Garetn.) Transcriptome Discloses Key Regulators Involved in Salt-Stress Response
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Title
De Novo Assembly and Analysis of Tartary Buckwheat (Fagopyrum tataricum Garetn.) Transcriptome Discloses Key Regulators Involved in Salt-Stress Response
Authors
Keywords
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Journal
Genes
Volume 8, Issue 10, Pages 255
Publisher
MDPI AG
Online
2017-10-03
DOI
10.3390/genes8100255
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- (2016) Hifzur Rahman et al. BMC BIOTECHNOLOGY
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- (2016) Shaofeng Li et al. BMC GENOMICS
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- (2016) Jian-Kang Zhu CELL
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- (2016) Xinbo Sun et al. PLANT CELL AND ENVIRONMENT
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- (2016) Shuai Li et al. Frontiers in Plant Science
- Salt-Responsive Transcriptome Profiling of Suaeda glauca via RNA Sequencing
- (2016) Hangxia Jin et al. PLoS One
- Transcriptome analysis in different rice cultivars provides novel insights into desiccation and salinity stress responses
- (2016) Rama Shankar et al. Scientific Reports
- Transcriptome profiling of the salt-stress response in Triticum aestivum cv. Kharchia Local
- (2016) Etika Goyal et al. Scientific Reports
- De novo transcriptome assembly and analysis of differentially expressed genes of two barley genotypes reveal root-zone-specific responses to salt exposure
- (2016) Camilla Beate Hill et al. Scientific Reports
- Genome-wide transcriptomic and phylogenetic analyses reveal distinct aluminum-tolerance mechanisms in the aluminum-accumulating species buckwheat (Fagopyrum tataricum)
- (2015) Haifeng Zhu et al. BMC PLANT BIOLOGY
- Transcriptional networks — crops, clocks, and abiotic stress
- (2015) Malia A Gehan et al. CURRENT OPINION IN PLANT BIOLOGY
- A Buckwheat (Fagopyrum esculentum) DRE-Binding Transcription Factor Gene, FeDREB1, Enhances Freezing and Drought Tolerance of Transgenic Arabidopsis
- (2015) Zhengwu Fang et al. PLANT MOLECULAR BIOLOGY REPORTER
- Next generation sequencing technology: Advances and applications
- (2014) H.P.J. Buermans et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE
- Salt resistant crop plants
- (2014) Stuart J Roy et al. CURRENT OPINION IN BIOTECHNOLOGY
- A Putative Lambda Class Glutathione S-Transferase Enhances Plant Survival under Salinity Stress
- (2014) Ching Chan et al. PLANT AND CELL PHYSIOLOGY
- Overexpression of OsMYB48-1, a Novel MYB-Related Transcription Factor, Enhances Drought and Salinity Tolerance in Rice
- (2014) Haiyan Xiong et al. PLoS One
- Plant salt-tolerance mechanisms
- (2014) Ulrich Deinlein et al. TRENDS IN PLANT SCIENCE
- PlantTFcat: an online plant transcription factor and transcriptional regulator categorization and analysis tool
- (2013) Xinbin Dai et al. BMC BIOINFORMATICS
- Genetic analyses of agronomic traits in Tartary buckwheat (Fagopyrum tataricum (L.) Gaertn.)
- (2013) Chunhua Li et al. BREEDING SCIENCE
- Novel perspectives for the engineering of abiotic stress tolerance in plants
- (2013) Julieta V Cabello et al. CURRENT OPINION IN BIOTECHNOLOGY
- Overexpression of the glutathione S-transferase gene from Pyrus pyrifolia fruit improves tolerance to abiotic stress in transgenic tobacco plants
- (2013) D. Liu et al. MOLECULAR BIOLOGY
- Overexpression of L-type lectin-like protein kinase 1 confers pathogen resistance and regulates salinity response in Arabidopsis thaliana
- (2013) Ping Huang et al. PLANT SCIENCE
- Release of SOS2 kinase from sequestration with GIGANTEA determines salt tolerance in Arabidopsis
- (2013) Woe-Yeon Kim et al. Nature Communications
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Wheat WRKY genes TaWRKY2 and TaWRKY19 regulate abiotic stress tolerance in transgenic Arabidopsis plants
- (2012) CAN-FANG NIU et al. PLANT CELL AND ENVIRONMENT
- Genetic Evidence for an Indispensable Role of Somatic Embryogenesis Receptor Kinases in Brassinosteroid Signaling
- (2012) Xiaoping Gou et al. PLoS Genetics
- Expression of OsDREB2A transcription factor confers enhanced dehydration and salt stress tolerance in rice (Oryza sativa L.)
- (2011) Garladinne Mallikarjuna et al. BIOTECHNOLOGY LETTERS
- RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
- (2011) Bo Li et al. BMC BIOINFORMATICS
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- (2011) Maria D Logacheva et al. BMC GENOMICS
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
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- (2011) Bénédicte Le Martret et al. PLANT BIOTECHNOLOGY JOURNAL
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- (2011) Yu-Jun Hao et al. PLANT JOURNAL
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- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
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- (2010) Do-Young Kim et al. PHYSIOLOGIA PLANTARUM
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- (2010) J. S. Jeong et al. PLANT PHYSIOLOGY
- Gene ontology analysis for RNA-seq: accounting for selection bias
- (2010) Matthew D Young et al. GENOME BIOLOGY
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- The Circadian System in Higher Plants
- (2009) Stacey L. Harmer Annual Review of Plant Biology
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- (2009) Likun Wang et al. BIOINFORMATICS
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- (2009) K. Nakashima et al. PLANT PHYSIOLOGY
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- (2008) Rana Munns et al. Annual Review of Plant Biology
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- (2008) S. Gotz et al. NUCLEIC ACIDS RESEARCH
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