High Density Linkage Map Construction and Mapping of Yield Trait QTLs in Maize (Zea mays) Using the Genotyping-by-Sequencing (GBS) Technology

Genetic dissection of maize plant architecture with an ultra-high density bin map based on recombinant inbred lines

(2016) Zhiqiang Zhou et al.   BMC GENOMICS

Genome-wide dissection of the maize ear genetic architecture using multiple populations

(2015) Yingjie Xiao et al.   NEW PHYTOLOGIST

An ultra-high density bin-map for rapid QTL mapping for tassel and ear architecture in a large F2 maize population

(2014) Zongliang Chen et al.   BMC GENOMICS

Genome Wide Association Studies Using a New Nonparametric Model Reveal the Genetic Architecture of 17 Agronomic Traits in an Enlarged Maize Association Panel

(2014) Ning Yang et al.   PLoS Genetics

Genotyping-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding

(2014) Jiangfeng He et al.   Frontiers in Plant Science

Genetic Mapping and Genomic Selection Using Recombination Breakpoint Data

(2013) Shizhong Xu   GENETICS

Marker Density and Read Depth for Genotyping Populations Using Genotyping-by-Sequencing

(2013) T. M. Beissinger et al.   GENETICS

Quantitative variation in maize kernel row number is controlled by the FASCIATED EAR2 locus

(2013) Peter Bommert et al.   NATURE GENETICS

Genome Wide Allele Frequency Fingerprints (GWAFFs) of Populations via Genotyping by Sequencing

(2013) Stephen Byrne et al.   PLoS One

An Improved Genotyping by Sequencing (GBS) Approach Offering Increased Versatility and Efficiency of SNP Discovery and Genotyping

(2013) Humira Sonah et al.   PLoS One

Genome-wide association analysis for nine agronomic traits in maize under well-watered and water-stressed conditions

(2013) Yadong Xue et al.   THEORETICAL AND APPLIED GENETICS

Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations

(2013) Jennifer Spindel et al.   THEORETICAL AND APPLIED GENETICS

Genomic Prediction in Maize Breeding Populations with Genotyping-by-Sequencing

(2013) José Crossa et al.   G3-Genes Genomes Genetics

Identification of QTLs for eight agronomically important traits using an ultra-high-density map based on SNPs generated from high-throughput sequencing in sorghum under contrasting photoperiods

(2012) Guihua Zou et al.   JOURNAL OF EXPERIMENTAL BOTANY

An Infinitesimal Model for Quantitative Trait Genomic Value Prediction

(2012) Zhiqiu Hu et al.   PLoS One

Genomic Selection in Wheat Breeding using Genotyping-by-Sequencing

(2012) Jesse Poland et al.   Plant Genome

A quantitative trait locus involved in maize yield is tightly associated to the r1 gene on the long arm of chromosome 10

(2011) Roberto Pilu et al.   MOLECULAR BREEDING

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

Gains in QTL Detection Using an Ultra-High Density SNP Map Based on Population Sequencing Relative to Traditional RFLP/SSR Markers

(2011) Huihui Yu et al.   PLoS One

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Verification and fine-mapping of QTLs conferring days to flowering in soybean using residual heterozygous lines

(2010) ChengFu Su et al.   CHINESE SCIENCE BULLETIN

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Genomics Assisted Improvement of Drought Tolerance in Maize: QTL Approaches

(2009) S. Tsonev et al.   BIOTECHNOLOGY & BIOTECHNOLOGICAL EQUIPMENT

High-throughput genotyping by whole-genome resequencing

(2009) X. Huang et al.   GENOME RESEARCH