Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae
Authors
Keywords
-
Journal
Frontiers in Microbiology
Volume 8, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2017-12-19
DOI
10.3389/fmicb.2017.02501
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats
- (2017) Meinhard Simon et al. ISME Journal
- High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
- (2017) Imen Nouioui et al. Standards in Genomic Sciences
- Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
- (2016) I-Min A. Chen et al. BMC GENOMICS
- Geodermatophilus pulveris sp. nov., a gamma-radiation-resistant actinobacterium isolated from the Sahara desert
- (2016) INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Blastococcus capsensis sp. nov., isolated from an archaeological Roman pool and emended description of the genus Blastococcus, B. aggregatus, B. saxobsidens, B. jejuensis and B. endophyticus
- (2016) Karima Hezbri et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- IMG/M: integrated genome and metagenome comparative data analysis system
- (2016) I-Min A. Chen et al. NUCLEIC ACIDS RESEARCH
- Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements
- (2016) Supratim Mukherjee et al. NUCLEIC ACIDS RESEARCH
- Genome-Based Taxonomic Classification of Bacteroidetes
- (2016) Richard L. Hahnke et al. Frontiers in Microbiology
- Geodermatophilus aquaeductus sp. nov., isolated from the ruins of Hadrian’s aqueduct
- (2015) Karima Hezbri et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Description of Geodermatophilus bullaregiensis sp. nov.
- (2015) Karima Hezbri et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Geodermatophilus sabuli sp. nov., a γ-radiation-resistant actinobacterium isolated from desert limestone
- (2015) Karima Hezbri et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Stone-dwelling actinobacteria Blastococcus saxobsidens, Modestobacter marinus and Geodermatophilus obscurus proteogenomes
- (2015) Haïtham Sghaier et al. ISME Journal
- FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program: Table 1.
- (2015) Vincent Lefort et al. MOLECULAR BIOLOGY AND EVOLUTION
- Fast Dating Using Least-Squares Criteria and Algorithms
- (2015) Thu-Hien To et al. SYSTEMATIC BIOLOGY
- The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
- (2015) Marcel Huntemann et al. Standards in Genomic Sciences
- Challenging the anthropocentric emphasis on phenotypic testing in prokaryotic species descriptions: rip it up and start again
- (2015) Iain C. Sutcliffe Frontiers in Genetics
- Time to revisit polyphasic taxonomy
- (2014) Peter Vandamme et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Microbial taxonomy in the post-genomic era: Rebuilding from scratch?
- (2014) Cristiane C. Thompson et al. ARCHIVES OF MICROBIOLOGY
- Description of gamma radiation-resistant Geodermatophilus dictyosporus sp. nov. to accommodate the not validly named Geodermatophilus obscurus subsp. dictyosporus (Luedemann, 1968)
- (2014) Maria del Carmen Montero-Calasanz et al. EXTREMOPHILES
- A polyphasic strategy incorporating genomic data for the taxonomic description of novel bacterial species
- (2014) D. Ramasamy et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Geodermatophilus brasiliensis sp. nov., isolated from Brazilian soil
- (2014) M. Bertazzo et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Taxonomic use of DNA G+C content and DNA–DNA hybridization in the genomic age
- (2014) Jan P. Meier-Kolthoff et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Phylogeny of the class Actinobacteria revisited in the light of complete genomes. The orders 'Frankiales' and Micrococcales should be split into coherent entities: proposal of Frankiales ord. nov., Geodermatophilales ord. nov., Acidothermales ord. nov. and Nakamurellales ord. nov.
- (2014) A. Sen et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains
- (2014) Nikos C. Kyrpides et al. PLOS BIOLOGY
- Geodermatophilus poikilotrophisp. nov.: A Multitolerant Actinomycete Isolated from Dolomitic Marble
- (2014) Maria del Carmen Montero-Calasanz et al. Biomed Research International
- Genome-scale data suggest reclassifications in the Leisingera-Phaeobacter cluster including proposals for Sedimentitalea gen. nov. and Pseudophaeobacter gen. nov.
- (2014) Sven Breider et al. Frontiers in Microbiology
- Geodermatophilus africanus sp. nov., a halotolerant actinomycete isolated from Saharan desert sand
- (2013) María del Carmen Montero-Calasanz et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- When should a DDH experiment be mandatory in microbial taxonomy?
- (2013) Jan P. Meier-Kolthoff et al. ARCHIVES OF MICROBIOLOGY
- opm: an R package for analysing OmniLog(R) phenotype microarray data
- (2013) L. A. I. Vaas et al. BIOINFORMATICS
- Genome sequence-based species delimitation with confidence intervals and improved distance functions
- (2013) Jan P Meier-Kolthoff et al. BMC BIOINFORMATICS
- Highly parallelized inference of large genome-based phylogenies
- (2013) Jan P. Meier-Kolthoff et al. CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE
- Description of Geodermatophilus amargosae sp. nov., to Accommodate the Not Validly Named Geodermatophilus obscurus subsp. amargosae (Luedemann, 1968)
- (2013) Maria del Carmen Montero-Calasanz et al. CURRENT MICROBIOLOGY
- Geodermatophilus taihuensis sp. nov., isolated from the interfacial sediment of a eutrophic lake
- (2013) J.-H. Qu et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Geodermatophilus normandii sp. nov., isolated from Saharan desert sand
- (2013) M. d. C. Montero-Calasanz et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- LPSN—list of prokaryotic names with standing in nomenclature
- (2013) Aidan C. Parte NUCLEIC ACIDS RESEARCH
- Geodermatophilus tzadiensis sp. nov., a UV radiation-resistant bacterium isolated from sand of the Saharan desert
- (2013) Maria del Carmen Montero-Calasanz et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- To name or not to name: Criteria to promote economy of change in Linnaean classification schemes
- (2013) MIGUEL VENCES et al. ZOOTAXA
- Microbial hitchhikers on intercontinental dust: high-throughput sequencing to catalogue microbes in small sand samples
- (2012) Adriana Giongo et al. AEROBIOLOGIA
- Geodermatophilus siccatus sp. nov., isolated from arid sand of the Saharan desert in Chad
- (2012) Maria del Carmen Montero-Calasanz et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Geodermatophilus nigrescens sp. nov., isolated from a dry-hot valley
- (2012) Guo-Xing Nie et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Geodermatophilus saharensis sp. nov., isolated from sand of the Saharan desert in Chad
- (2012) M. C. Montero-Calasanz et al. ARCHIVES OF MICROBIOLOGY
- Geodermatophilus arenarius sp. nov., a xerophilic actinomycete isolated from Saharan desert sand in Chad
- (2012) M. C. Montero-Calasanz et al. EXTREMOPHILES
- Life at the hyperarid margin: novel bacterial diversity in arid soils of the Atacama Desert, Chile
- (2012) Julia W. Neilson et al. EXTREMOPHILES
- Contrasted resistance of stone-dwelling Geodermatophilaceae species to stresses known to give rise to reactive oxygen species
- (2012) Maher Gtari et al. FEMS MICROBIOLOGY ECOLOGY
- Geodermatophilus soli sp. nov. and Geodermatophilus terrae sp. nov., two actinobacteria isolated from grass soil
- (2012) L. Jin et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Geodermatophilus telluris sp. nov., an actinomycete isolated from Saharan desert sand
- (2012) M. d. C. Montero-Calasanz et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Visualization and Curve-Parameter Estimation Strategies for Efficient Exploration of Phenotype Microarray Kinetics
- (2012) Lea A. I. Vaas et al. PLoS One
- Complete genome sequence of Isosphaera pallida type strain (IS1BT)
- (2011) Markus Göker et al. Standards in Genomic Sciences
- Geodermatophilus ruber sp. nov., isolated from rhizosphere soil of a medicinal plant
- (2010) Y.-Q. Zhang et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- En route to a genome-based classification of Archaea and Bacteria?
- (2010) H.-P. Klenk et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Complete genome sequence of Geodermatophilus obscurus type strain (G-20T)
- (2010) Natalia Ivanova et al. Standards in Genomic Sciences
- Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison
- (2010) Alexander F. Auch et al. Standards in Genomic Sciences
- Unringing a bell: metazoan phylogenomics and the partition bootstrap
- (2009) Mark E. Siddall CLADISTICS
- Nonomuraea rosea sp. nov.
- (2009) P. Kampfer et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa
- (2009) X.-Y. Zhi et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Evidence, Content and Corroboration and the Tree of Life
- (2008) E. Kurt Lienau et al. ACTA BIOTHEORETICA
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started