Cyanobacterial Diversity in Microbial Mats from the Hypersaline Lagoon System of Araruama, Brazil: An In-depth Polyphasic Study

A polyphasic approach for the taxonomy of cyanobacteria: principles and applications

(2016) Jiří Komárek   EUROPEAN JOURNAL OF PHYCOLOGY

A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity

(2016) Nam-Phuong Nguyen et al.   npj Biofilms and Microbiomes

TUIT, a BLAST-based tool for taxonomic classification of nucleotide sequences

(2016) Alexander Tuzhikov et al.   BIOTECHNIQUES

Species concepts and speciation factors in cyanobacteria, with connection to the problems of diversity and classification

(2015) Petr Dvořák et al.   BIODIVERSITY AND CONSERVATION

The Rebirth of Culture in Microbiology through the Example of Culturomics To Study Human Gut Microbiota

(2015) Jean-Christophe Lagier et al.   CLINICAL MICROBIOLOGY REVIEWS

Consistency of metagenomic assignment programs in simulated and real data

(2014) Koldo Garcia-Etxebarria et al.   BMC BIOINFORMATICS

Limits to robustness and reproducibility in the demarcation of operational taxonomic units

(2014) Thomas S. B. Schmidt et al.   ENVIRONMENTAL MICROBIOLOGY

Unravelling the Diversity of Grapevine Microbiome

(2014) Cátia Pinto et al.   PLoS One

Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories

(2014) E. Kathryn Morris et al.   Ecology and Evolution

Oxynema, a New Genus Separated from the Genus Phormidium (Cyanophyta)

(2013) Thomrat Chatchawan et al.   CRYPTOGAMIE ALGOLOGIE

Analysis of artifacts suggests DGGE should not be used for quantitative diversity analysis

(2013) Julia W. Neilson et al.   JOURNAL OF MICROBIOLOGICAL METHODS

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Taxonomic Classification of Bacterial 16S rRNA Genes Using Short Sequencing Reads: Evaluation of Effective Study Designs

(2013) Orna Mizrahi-Man et al.   PLoS One

Lineage-Specific Responses of Microbial Communities to Environmental Change

(2012) Nicholas D. Youngblut et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat

(2012) J Kirk Harris et al.   ISME Journal

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Culture-dependent characterization of cyanobacterial diversity in the intertidal zones of the Portuguese coast: A polyphasic study

(2012) Ângela Brito et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification

(2011) David Berry et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

DECIPHER, a Search-Based Approach to Chimera Identification for 16S rRNA Sequences

(2011) Erik S. Wright et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Interactive metagenomic visualization in a Web browser

(2011) Brian D Ondov et al.   BMC BIOINFORMATICS

Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis

(2011) Matthew B. Scholz et al.   CURRENT OPINION IN BIOTECHNOLOGY

Comparative microbial diversity analyses of modern marine thrombolitic mats by barcoded pyrosequencing

(2011) Jennifer M. Mobberley et al.   ENVIRONMENTAL MICROBIOLOGY

Diazotrophic microbial community of coastal microbial mats of the southern North Sea

(2011) T. BAUERSACHS et al.   Geobiology

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Microbial Community Changes Elicited by Exposure to Cyanobacterial Allelochemicals

(2011) Pedro N. Leão et al.   MICROBIAL ECOLOGY

The NCBI Taxonomy database

(2011) S. Federhen   NUCLEIC ACIDS RESEARCH

Characterization of an intertidal cyanobacterium that constitutes a separate clade together with thermophilic strains

(2010) Vitor Ramos et al.   EUROPEAN JOURNAL OF PHYCOLOGY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Overview of biopolymer-induced mineralization: What goes on in biofilms?

(2009) Alan W. Decho   ECOLOGICAL ENGINEERING

Influence of primer mismatch and microdiversity on DGGE results: a case study with SAR11

(2008) O Sánchez et al.   AQUATIC MICROBIAL ECOLOGY

Processes of carbonate precipitation in modern microbial mats

(2008) Christophe Dupraz et al.   EARTH-SCIENCE REVIEWS

Flat laminated microbial mat communities

(2008) Jonathan Franks et al.   EARTH-SCIENCE REVIEWS

Prokaryotic diversity in one of the largest hypersaline coastal lagoons in the world

(2008) M. M. Clementino et al.   EXTREMOPHILES

Determining the specific microbial populations and their spatial distribution within the stromatolite ecosystem of Shark Bay

(2008) Falicia Goh et al.   ISME Journal

Improved group-specific PCR primers for denaturing gradient gel electrophoresis analysis of the genetic diversity of complex microbial communities

(2008) Martin Mühling et al.   ISME Journal

COLEOFASCICULUSGEN. NOV. (CYANOBACTERIA): MORPHOLOGICAL AND MOLECULAR CRITERIA FOR REVISION OF THE GENUSMICROCOLEUSGOMONT1

(2008) Maria A. Siegesmund et al.   JOURNAL OF PHYCOLOGY