Isolation and Characterization of Bacteria That Degrade Phosphonates in Marine Dissolved Organic Matter
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Title
Isolation and Characterization of Bacteria That Degrade Phosphonates in Marine Dissolved Organic Matter
Authors
Keywords
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Journal
Frontiers in Microbiology
Volume 8, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2017-10-04
DOI
10.3389/fmicb.2017.01786
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Note: Only part of the references are listed.- Environmental drivers of a microbial genomic transition zone in the ocean’s interior
- (2017) Daniel R. Mende et al. Nature Microbiology
- Direct single-cell biomass estimates for marine bacteria via Archimedes’ principle
- (2016) Nathan Cermak et al. ISME Journal
- Marine methane paradox explained by bacterial degradation of dissolved organic matter
- (2016) Daniel J. Repeta et al. Nature Geoscience
- Quantitative Transcriptomics Reveals the Growth- and Nutrient-Dependent Response of a Streamlined Marine Methylotroph to Methanol and Naturally Occurring Dissolved Organic Matter
- (2016) Scott M. Gifford et al. mBio
- VSEARCH: a versatile open source tool for metagenomics
- (2016) Torbjørn Rognes et al. PeerJ
- High molecular weight dissolved organic matter enrichment selects for methylotrophs in dilution to extinction cultures
- (2015) Oscar A Sosa et al. ISME Journal
- eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
- (2015) Jaime Huerta-Cepas et al. NUCLEIC ACIDS RESEARCH
- Microbial community transcriptional networks are conserved in three domains at ocean basin scales
- (2015) Frank O. Aylward et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Aerobic production of methane from dissolved water-column methylphosphonate and sinking particles in the North Pacific Subtropical Gyre
- (2014) DA del Valle et al. AQUATIC MICROBIAL ECOLOGY
- Estimating the compensation irradiance in the ocean: The importance of accounting for non-photosynthetic uptake of inorganic carbon
- (2014) Edward A. Laws et al. DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS
- Microbial oceanography and the Hawaii Ocean Time-series programme
- (2014) David M. Karl et al. NATURE REVIEWS MICROBIOLOGY
- Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages
- (2014) E. A. Ottesen et al. SCIENCE
- Methane production by phosphate-starved SAR11 chemoheterotrophic marine bacteria
- (2014) Paul Carini et al. Nature Communications
- Structure and Function of Phosphonoacetaldehyde Dehydrogenase: The Missing Link in Phosphonoacetate Formation
- (2013) Vinayak Agarwal et al. CHEMISTRY & BIOLOGY
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Metatranscriptomic and functional metagenomic analysis of methylphosphonate utilization by marine bacteria
- (2013) Asunción Martínez et al. Frontiers in Microbiology
- SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
- (2012) Elmar Pruesse et al. BIOINFORMATICS
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- dbCAN: a web resource for automated carbohydrate-active enzyme annotation
- (2012) Yanbin Yin et al. NUCLEIC ACIDS RESEARCH
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Synthesis of Methylphosphonic Acid by Marine Microbes: A Source for Methane in the Aerobic Ocean
- (2012) W. W. Metcalf et al. SCIENCE
- The genes and enzymes of phosphonate metabolism by bacteria, and their distribution in the marine environment
- (2012) Juan F. Villarreal-Chiu Frontiers in Microbiology
- Organic matter transformations in the upper mesopelagic zone of the North Pacific: Chemical composition and linkages to microbial community structure
- (2011) Karl Kaiser et al. JOURNAL OF GEOPHYSICAL RESEARCH
- Microbial oceanography of the dark ocean's pelagic realm
- (2011) Javier Arístegui et al. LIMNOLOGY AND OCEANOGRAPHY
- Release LTPs104 of the All-Species Living Tree
- (2011) Raúl Munoz et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Oceanic heterotrophic bacterial nutrition by semilabile DOM as revealed by data assimilative modeling
- (2010) YW Luo et al. AQUATIC MICROBIAL ECOLOGY
- Depth distributions of alkaline phosphatase and phosphonate utilization genes in the North Pacific Subtropical Gyre
- (2010) H Luo et al. AQUATIC MICROBIAL ECOLOGY
- Dissolved organic carbon export and subsequent remineralization in the mesopelagic and bathypelagic realms of the North Atlantic basin
- (2010) Craig A. Carlson et al. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Widespread known and novel phosphonate utilization pathways in marine bacteria revealed by functional screening and metagenomic analyses
- (2009) Asuncion Martinez et al. ENVIRONMENTAL MICROBIOLOGY
- A microbial source of phosphonates in oligotrophic marine systems
- (2009) Sonya T. Dyhrman et al. Nature Geoscience
- The Complete Genome of Teredinibacter turnerae T7901: An Intracellular Endosymbiont of Marine Wood-Boring Bivalves (Shipworms)
- (2009) Joyce C. Yang et al. PLoS One
- Insights into Plant Cell Wall Degradation from the Genome Sequence of the Soil Bacterium Cellvibrio japonicus
- (2008) R. T. DeBoy et al. JOURNAL OF BACTERIOLOGY
- A New Member of the Alkaline Phosphatase Superfamily with a Formylglycine Nucleophile: Structural and Kinetic Characterisation of a Phosphonate Monoester Hydrolase/Phosphodiesterase from Rhizobium leguminosarum
- (2008) Stefanie Jonas et al. JOURNAL OF MOLECULAR BIOLOGY
- The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
- (2008) B. L. Cantarel et al. NUCLEIC ACIDS RESEARCH
- Complete Genome Sequence of the Complex Carbohydrate-Degrading Marine Bacterium, Saccharophagus degradans Strain 2-40T
- (2008) Ronald M. Weiner et al. PLoS Genetics
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