T cell receptor repertoires of mice and humans are clustered in similarity networks around conserved public CDR3 sequences
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Title
T cell receptor repertoires of mice and humans are clustered in similarity networks around conserved public CDR3 sequences
Authors
Keywords
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Journal
eLife
Volume 6, Issue -, Pages -
Publisher
eLife Sciences Organisation, Ltd.
Online
2017-07-19
DOI
10.7554/elife.22057
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- (2014) Asaf Madi et al. GENOME RESEARCH
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- (2013) P. G. Thomas et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- A travel guide to Cytoscape plugins
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- (2012) W. Ndifon et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2010) M. E. Smoot et al. BIOINFORMATICS
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- (2010) H. S. Robins et al. Science Translational Medicine
- ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data
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- (2009) Federico Serana et al. Journal of Translational Medicine
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