Identification of small RNAs in extracellular vesicles from the commensal yeast Malassezia sympodialis

A Novel Mechanism of Host-Pathogen Interaction through sRNA in Bacterial Outer Membrane Vesicles

(2016) Katja Koeppen et al.   PLoS Pathogens

Dendritic cell-derived exosomes carry the major cat allergen Fel d 1 and induce an allergic immune response

(2015) H. Vallhov et al.   ALLERGY

Circulating microRNAs: potential biomarkers for common malignancies

(2015) Samantha Khoury et al.   Biomarkers in Medicine

Role of exosomes and microvesicles in hypoxia-associated tumour development and cardiovascular disease

(2015) M. Belting et al.   JOURNAL OF INTERNAL MEDICINE

Through the wall: extracellular vesicles in Gram-positive bacteria, mycobacteria and fungi

(2015) Lisa Brown et al.   NATURE REVIEWS MICROBIOLOGY

Functional mapping of the plant small RNA methyltransferase: HEN1 physically interacts with HYL1 and DICER-LIKE 1 proteins

(2015) Simona Baranauskė et al.   NUCLEIC ACIDS RESEARCH

Exosomes and Other Extracellular Vesicles: The New Communicators in Parasite Infections

(2015) Gillian Coakley et al.   TRENDS IN PARASITOLOGY

Extracellular vesicle-mediated export of fungal RNA

(2015) Roberta Peres da Silva et al.   Scientific Reports

Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin

(2015) Guangxi Wu et al.   PLoS Genetics

Traveling into Outer Space: Unanswered Questions about Fungal Extracellular Vesicles

(2015) Marcio L. Rodrigues et al.   PLoS Pathogens

PacBio Sequencing and Its Applications

(2015) Anthony Rhoads et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Compositional and immunobiological analyses of extracellular vesicles released byCandida albicans

(2014) Gabriele Vargas et al.   CELLULAR MICROBIOLOGY

Challenges posed by extracellular vesicles from eukaryotic microbes

(2014) Julie M. Wolf et al.   CURRENT OPINION IN MICROBIOLOGY

Roles of small RNAs in soybean defense againstPhytophthora sojaeinfection

(2014) James Wong et al.   PLANT JOURNAL

Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity

(2014) Amy H. Buck et al.   Nature Communications

RNAi function, diversity, and loss in the fungal kingdom

(2013) R. Blake Billmyre et al.   CHROMOSOME RESEARCH

Epstein–Barr Virus (EBV) MicroRNAs: Involvement in Cancer Pathogenesis and Immunopathology

(2013) Leandra Fiori Lopes et al.   INTERNATIONAL REVIEWS OF IMMUNOLOGY

Topographic diversity of fungal and bacterial communities in human skin

(2013) Keisha Findley et al.   NATURE

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

MicroRNAs act complementarily to regulate disease-related mRNA modules in human diseases

(2013) S. Chavali et al.   RNA

Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways

(2013) Arne Weiberg et al.   SCIENCE

Genomic Insights into the Atopic Eczema-Associated Skin Commensal Yeast Malassezia sympodialis

(2013) A. Gioti et al.   mBio

Convergent Transcription Induces Dynamic DNA Methylation at disiRNA Loci

(2013) Yunkun Dang et al.   PLoS Genetics

Loss and Retention of RNA Interference in Fungi and Parasites

(2013) Francisco E. Nicolás et al.   PLoS Pathogens

RNA Interference Pathways in Fungi: Mechanisms and Functions

(2012) Shwu-Shin Chang et al.   Annual Review of Microbiology

Translocation of Sickle Cell Erythrocyte MicroRNAs into Plasmodium falciparum Inhibits Parasite Translation and Contributes to Malaria Resistance

(2012) Gregory LaMonte et al.   Cell Host & Microbe

Identification of microRNA-like RNAs in a plant pathogenic fungus Sclerotinia sclerotiorum by high-throughput sequencing

(2012) Jiahong Zhou et al.   MOLECULAR GENETICS AND GENOMICS

Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing

(2012) Gang Fang et al.   NATURE BIOTECHNOLOGY

Malassezia Fungi Are Specialized to Live on Skin and Associated with Dandruff, Eczema, and Other Skin Diseases

(2012) Charles W. Saunders et al.   PLoS Pathogens

MiRPara: a SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences

(2011) Yonggan Wu et al.   BMC BIOINFORMATICS

Diverse and tissue-enriched small RNAs in the plant pathogenic fungus, Magnaporthe oryzae

(2011) Cristiano C Nunes et al.   BMC GENOMICS

Nanovesicles from Malassezia sympodialis and Host Exosomes Induce Cytokine Responses – Novel Mechanisms for Host-Microbe Interactions in Atopic Eczema

(2011) Ulf Gehrmann et al.   PLoS One

Malassezia virulence determinants

(2010) Wiebke Hort et al.   CURRENT OPINION IN INFECTIOUS DISEASES

Diverse Pathways Generate MicroRNA-like RNAs and Dicer-Independent Small Interfering RNAs in Fungi

(2010) Heng-Chi Lee et al.   MOLECULAR CELL

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Many roads to maturity: microRNA biogenesis pathways and their regulation

(2009) Julia Winter et al.   NATURE CELL BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Exosomes – nanovesicles with possible roles in allergic inflammation

(2008) C. Admyre et al.   ALLERGY

Atopic Dermatitis

(2008) Thomas Bieber   NEW ENGLAND JOURNAL OF MEDICINE