Elucidating the major hidden genomic components of the A, C, and AC genomes and their influence on Brassica evolution
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Elucidating the major hidden genomic components of the A, C, and AC genomes and their influence on Brassica evolution
Authors
Keywords
-
Journal
Scientific Reports
Volume 7, Issue 1, Pages -
Publisher
Springer Nature
Online
2017-12-15
DOI
10.1038/s41598-017-18048-9
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Brassica rapa Genome 2.0: A Reference Upgrade through Sequence Re-assembly and Gene Re-annotation
- (2017) Chengcheng Cai et al. Molecular Plant
- Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea
- (2016) Feng Cheng et al. NATURE GENETICS
- The First Rule of Plant Transposable Element Silencing: Location, Location, Location
- (2016) Meredith J. Sigman et al. PLANT CELL
- The pangenome of an agronomically important crop plant Brassica oleracea
- (2016) Agnieszka A. Golicz et al. Nature Communications
- Progress, challenges and the future of crop genomes
- (2015) Todd P Michael et al. CURRENT OPINION IN PLANT BIOLOGY
- Comparative Analysis of Transposable Elements Highlights Mobilome Diversity and Evolution in Vertebrates
- (2015) Domitille Chalopin et al. Genome Biology and Evolution
- Diversity and Inheritance of Intergenic Spacer Sequences of 45S Ribosomal DNA among Accessions of Brassica oleracea L. var. capitata
- (2015) Kiwoung Yang et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Analysis of the giant genomes ofFritillaria(Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size
- (2015) Laura J. Kelly et al. NEW PHYTOLOGIST
- Nested radiations and the pulse of angiosperm diversification: increased diversification rates often follow whole genome duplications
- (2015) David C. Tank et al. NEW PHYTOLOGIST
- Transposons play an important role in the evolution and diversification of centromeres among closely related species
- (2015) Dongying Gao et al. Frontiers in Plant Science
- Species-wide genome sequence and nucleotide polymorphisms from the model allopolyploid plant Brassica napus
- (2015) Thomas Schmutzer et al. Scientific Data
- The Peculiar Landscape of Repetitive Sequences in the Olive (Olea europaea L.) Genome
- (2014) Elena Barghini et al. Genome Biology and Evolution
- Comparative analysis of Cassandra TRIMs in three Brassicaceae genomes
- (2014) Perumal Sampath et al. Plant Genetic Resources-Characterization and Utilization
- Major repeat components covering one-third of the ginseng (Panax ginsengC.A. Meyer) genome and evidence for allotetraploidy
- (2014) Hong-Il Choi et al. PLANT JOURNAL
- Genome-Wide Comparative Analysis of 20 Miniature Inverted-Repeat Transposable Element Families in Brassica rapa and B. oleracea
- (2014) Perumal Sampath et al. PLoS One
- Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome
- (2014) B. Chalhoub et al. SCIENCE
- The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes
- (2014) Shengyi Liu et al. Nature Communications
- Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea
- (2014) Isobel AP Parkin et al. GENOME BIOLOGY
- Genome triplication drove the diversification of Brassica plants
- (2014) Feng Cheng et al. Horticulture Research
- Repetitive Sequences in Plant Nuclear DNA: Types, Distribution, Evolution and Function
- (2014) Shweta Mehrotra et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads
- (2013) P. Novak et al. BIOINFORMATICS
- Computational tools for copy number variation (CNV) detection using next-generation sequencing data: features and perspectives
- (2013) Min Zhao et al. BMC BIOINFORMATICS
- Characterization of a new high copy Stowaway family MITE, BRAMI-1 in Brassica genome
- (2013) Perumal Sampath et al. BMC PLANT BIOLOGY
- The First 50 Plant Genomes
- (2013) Todd P. Michael et al. Plant Genome
- Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution
- (2013) Daniël P Melters et al. GENOME BIOLOGY
- Next-generation sequencing technologies: opportunities and obligations in plant genomics
- (2012) R. K. Varshney et al. Briefings in Functional Genomics
- New Insights into Nested Long Terminal Repeat Retrotransposons in Brassica Species
- (2012) Lijuan Wei et al. Molecular Plant
- How important are transposons for plant evolution?
- (2012) Damon Lisch NATURE REVIEWS GENETICS
- Transposable Elements, Epigenetics, and Genome Evolution
- (2012) N. V. Fedoroff SCIENCE
- The Impact of Genome Triplication on Tandem Gene Evolution in Brassica rapa
- (2012) Lu Fang et al. Frontiers in Plant Science
- Current challenges in de novo plant genome sequencing and assembly
- (2012) Michael C Schatz et al. GENOME BIOLOGY
- Human Genome Sequencing in Health and Disease
- (2011) Claudia Gonzaga-Jauregui et al. Annual Review of Medicine
- Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived Repetitive DNAs
- (2011) S. Renny-Byfield et al. MOLECULAR BIOLOGY AND EVOLUTION
- The genome of the mesopolyploid crop species Brassica rapa
- (2011) Xiaowu Wang et al. NATURE GENETICS
- Rapid divergence of repetitive DNAs in Brassica relatives
- (2010) Dal-Hoe Koo et al. GENOMICS
- A window into third-generation sequencing
- (2010) E. E. Schadt et al. HUMAN MOLECULAR GENETICS
- Sequence and structure of Brassica rapa chromosome A3
- (2010) Jeong-Hwan Mun et al. GENOME BIOLOGY
- Unexpected consequences of a sudden and massive transposon amplification on rice gene expression
- (2009) Ken Naito et al. NATURE
- Impact of transposable elements on the organization and function of allopolyploid genomes
- (2009) Christian Parisod et al. NEW PHYTOLOGIST
- Plant genome sequencing: applications for crop improvement
- (2009) David Edwards et al. PLANT BIOTECHNOLOGY JOURNAL
- The CACTA transposonBot1played a major role inBrassicagenome divergence and gene proliferation
- (2008) Karine Alix et al. PLANT JOURNAL
- Genome-Wide Analysis of Transposon Insertion Polymorphisms Reveals Intraspecific Variation in Cultivated Rice
- (2008) X. Huang et al. PLANT PHYSIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started