Genome-Wide Comparative Analysis of 20 Miniature Inverted-Repeat Transposable Element Families in Brassica rapa and B. oleracea

MITE Digger, an efficient and accurate algorithm for genome wide discovery of miniature inverted repeat transposable elements

(2013) Guojun Yang   BMC BIOINFORMATICS

Bolbase: a comprehensive genomics database for Brassica oleracea

(2013) Jingyin Yu et al.   BMC GENOMICS

Characterization of a new high copy Stowaway family MITE, BRAMI-1 in Brassica genome

(2013) Perumal Sampath et al.   BMC PLANT BIOLOGY

P-MITE: a database for plant miniature inverted-repeat transposable elements

(2013) Jiongjiong Chen et al.   NUCLEIC ACIDS RESEARCH

Characterization of Imcrop, a Mutator-like MITE family in the rice genome

(2012) Young-Jun Mo et al.   Genes & Genomics

Mobilization of Stowaway-like MITEs in newly formed allohexaploid wheat species

(2012) Beery Yaakov et al.   PLANT MOLECULAR BIOLOGY

Transposable-Element Associated Small RNAs in Bombyx mori Genome

(2012) Yimei Cai et al.   PLoS One

Characterization of active miniature inverted-repeat transposable elements in the peanut genome

(2012) Kenta Shirasawa et al.   THEORETICAL AND APPLIED GENETICS

Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution

(2012) Beery Yaakov et al.   THEORETICAL AND APPLIED GENETICS

Transposable element small RNAs as regulators of gene expression

(2012) Andrea D. McCue et al.   TRENDS IN GENETICS

Birth, death and subfunctionalization in the Arabidopsis genome

(2012) Matthew T. Rutter et al.   TRENDS IN PLANT SCIENCE

Role of Transposon-Derived Small RNAs in the Interplay between Genomes and Parasitic DNA in Rice

(2012) Misuzu Nosaka et al.   PLoS Genetics

BRAD, the genetics and genomics database for Brassica plants

(2011) Feng Cheng et al.   BMC PLANT BIOLOGY

Miniature Inverted-Repeat Transposable Elements (MITEs) Have Been Accumulated through Amplification Bursts and Play Important Roles in Gene Expression and Species Diversity in Oryza sativa

(2011) C. Lu et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genome of the mesopolyploid crop species Brassica rapa

(2011) Xiaowu Wang et al.   NATURE GENETICS

BraSto, a Stowaway MITE from Brassica: recently active copies preferentially accumulate in the gene space

(2011) Véronique Sarilar et al.   PLANT MOLECULAR BIOLOGY

The Rice Miniature Inverted Repeat Transposable Element mPing Is an Effective Insertional Mutagen in Soybean

(2011) C. N. Hancock et al.   PLANT PHYSIOLOGY

Burst expansion, distribution and diversification of MITEs in the silkworm genome

(2010) Min-Jin Han et al.   BMC GENOMICS

Miniature Inverted-Repeat Transposable Elements of Stowaway Are Active in Potato

(2010) Masaki Momose et al.   GENETICS

MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences

(2010) Y. Han et al.   NUCLEIC ACIDS RESEARCH

Sequence and structure of Brassica rapa chromosome A3

(2010) Jeong-Hwan Mun et al.   GENOME BIOLOGY

High Potential of a Transposon mPing as a Marker System in japonica x japonica Cross in Rice

(2009) Y. Monden et al.   DNA RESEARCH

MUST: A system for identification of miniature inverted-repeat transposable elements and applications to Anabaena variabilis and Haloquadratum walsbyi

(2009) Yong Chen et al.   GENE

Recent amplification and impact of MITEs on the genome of grapevine (Vitis vinifera L.)

(2009) Andrej Benjak et al.   Genome Biology and Evolution

Epigenetic silencing of transposable elements: A trade-off between reduced transposition and deleterious effects on neighboring gene expression

(2009) J. D. Hollister et al.   GENOME RESEARCH

Unexpected consequences of a sudden and massive transposon amplification on rice gene expression

(2009) Ken Naito et al.   NATURE

Evidence for Co-Evolution between Human MicroRNAs and Alu-Repeats

(2009) Stefan Lehnert et al.   PLoS One

MITEs--The Ultimate Parasites

(2009) J. Gonzalez et al.   SCIENCE

Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication

(2009) Jeong-Hwan Mun et al.   GENOME BIOLOGY

Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: New functional implications for MITEs

(2008) H. Kuang et al.   GENOME RESEARCH

The Dynamic Ups and Downs of Genome Size Evolution in Brassicaceae

(2008) M. A. Lysak et al.   MOLECULAR BIOLOGY AND EVOLUTION

Transposable elements and the evolution of regulatory networks

(2008) Cédric Feschotte   NATURE REVIEWS GENETICS