4.5 Article

Postnatal diet remodels hepatic DNA methylation in metabolic pathways established by a maternal high-fat diet

Journal

EPIGENOMICS
Volume 9, Issue 11, Pages 1387-1402

Publisher

FUTURE MEDICINE LTD
DOI: 10.2217/epi-2017-0066

Keywords

DNA methylation; genome-wide; MeDIP-seq; metabolism; MRE-seq

Funding

  1. UIUC [12192]
  2. University Library at the University of Illinois at Urbana-Champaign

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Aim: We investigate how postweaning diet may modify the epigenetic landscape to meet metabolic demands later in life. Methods: Sprague-Dawley rats were exposed to a high-fat (HF) diet during gestation and lactation. At weaning, male offspring were placed either on an HF diet (HF/HF) or a control diet (HF/C). Methylation-dependent immunoprecipitation sequencing and methylation-sensitive restriction enzyme sequencing were used to quantify hepatic DNA methylation. Results: Out of the 3966 identified differentially methylated regions, 37% were mapped to gene bodies while 6% fell within promoter or downstream regions. Differentially methylated genes were clustered in the type II diabetes mellitus and the adipocytokine signaling pathways. Conclusion: Our results indicate that compared with a lifelong HF diet, offspring exposed to a new postweaning control diet are able to remodel the hepatic epigenome, emphasizing the dynamic nature of the methylome even after early life.

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