4.7 Article

Recipient-Biased Competition for an Intracellularly Generated Cross-Fed Nutrient Is Required for Coexistence of Microbial Mutualists

Journal

MBIO
Volume 8, Issue 6, Pages -

Publisher

AMER SOC MICROBIOLOGY
DOI: 10.1128/mBio.01620-17

Keywords

cross-feeding; coculture; fermentation; hydrogen; microbial communities; mutualism; nitrogen fixation; purple bacteria; synthetic ecology

Categories

Funding

  1. U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research [DE-SC0008131]
  2. U.S. Army Research Office [W911NF-14-1-0411]
  3. Indiana University College of Arts and Sciences
  4. U.S. Department of Energy (DOE) [DE-SC0008131] Funding Source: U.S. Department of Energy (DOE)

Ask authors/readers for more resources

Many mutualistic microbial relationships are based on nutrient cross-feeding. Traditionally, cross-feeding is viewed as being unidirectional, from the producer to the recipient. This is likely true when a producer's waste, such as a fermentation product, has value only for a recipient. However, in some cases the cross-fed nutrient holds value for both the producer and the recipient. In such cases, there is potential for nutrient reacquisition by producer cells in a population, leading to competition against recipients. Here, we investigated the consequences of interpartner competition for cross-fed nutrients on mutualism dynamics by using an anaerobic coculture pairing fermentative Escherichia coli and phototrophic Rhodopseudomonas palustris. In this coculture, E. coli excretes waste organic acids that provide a carbon source for R. palustris. In return, R. palustris cross-feeds E. coli ammonium (NH4+), a compound that both species value. To explore the potential for interpartner competition, we first used a kinetic model to simulate cocultures with varied affinities for NH4+ in each species. The model predicted that interpartner competition for NH4+ could profoundly impact population dynamics. We then experimentally tested the predictions by culturing mutants lacking NH4+ transporters in both NH4+ competition assays and mutualistic cocultures. Both theoretical and experimental results indicated that the recipient must have a competitive advantage in acquiring cross-fed NH4+ to sustain the mutualism. This recipient-biased competitive advantage is predicted to be crucial, particularly when the communally valuable nutrient is generated intracellularly. Thus, the very metabolites that form the basis for mutualistic cross-feeding can also be subject to competition between mutualistic partners. IMPORTANCE Mutualistic relationships, particularly those based on nutrient cross-feeding, promote stability of diverse ecosystems and drive global biogeochemical cycles. Cross-fed nutrients within these systems can be either waste products valued by only one partner or nutrients valued by both partners. Here, we explored how interpartner competition for a communally valuable cross-fed nutrient impacts mutualism dynamics. We discovered that mutualism stability necessitates that the recipient have a competitive advantage against the producer in obtaining the cross-fed nutrient, provided that the nutrient is generated intracellularly. We propose that the requirement for recipient-biased competition is a general rule for mutualistic coexistence based on the transfer of intracellularly generated, communally valuable resources.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Biotechnology & Applied Microbiology

A Rhizobiales-Specific Unipolar Polysaccharide Adhesin Contributes to Rhodopseudomonas palustris Biofilm Formation across Diverse Photoheterotrophic Conditions

Ryan K. Fritts, Breah LaSarre, Ari M. Stoner, Amanda L. Posto, James B. McKinlay

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2017)

Article Microbiology

Restricted Localization of Photosynthetic Intracytoplasmic Membranes (ICMs) in Multiple Genera of Purple Nonsulfur Bacteria

Breah LaSarre, David T. Kysela, Barry D. Stein, Adrien Ducret, Yves V. Brun, James B. McKinlay

Article Biotechnology & Applied Microbiology

An Escherichia coli Nitrogen Starvation Response Is Important for Mutualistic Coexistence with Rhodopseudomonas palustris

Alexandra L. McCully, Megan G. Behringer, Jennifer R. Gliessman, Evgeny V. Pilipenko, Jeffrey L. Mazny, Michael Lynch, D. Allan Drummond, James B. McKinlay

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2018)

Article Microbiology

Characterization of a Glycyl Radical Enzyme Bacterial Microcompartment Pathway in Rhodobacter capsulatus

Heidi S. Schindel, Jonathan A. Karty, James B. McKinlay, Carl E. Bauer

JOURNAL OF BACTERIOLOGY (2019)

Article Biotechnology & Applied Microbiology

Cell Aggregation and Aerobic Respiration Are Important for Zymomonas mobilis ZM4 Survival in an Aerobic Minimal Medium

Sara E. Jones-Burrage, Timothy A. Kremer, James B. McKinley

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2019)

Article Biotechnology & Applied Microbiology

Phototrophic Lactate Utilization by Rhodopseudomonas palustris Is Stimulated by Coutilization with Additional Substrates

Alekhya Govindaraju, James B. McKinlay, Breah LaSarre

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2019)

Article Microbiology

Reductive tricarboxylic acid cycle enzymes and reductive amino acid synthesis pathways contribute to electron balance in a Rhodospirillum rubrum Calvin-cycle mutant

Alexandra L. McCully, Maureen C. Onyeziri, Breah LaSarre, Jennifer R. Gliessman, James B. McKinlay

MICROBIOLOGY-SGM (2020)

Article Biotechnology & Applied Microbiology

Covert Cross-Feeding Revealed by Genome-Wide Analysis o Fitness Determinants in a Synthetic Bacterial Mutualism

Breah LaSarre, Adam M. Deutschbauer, Crystal E. Love, James B. McKinlay

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2020)

Article Ecology

Enhanced nutrient uptake is sufficient to drive emergent cross-feeding between bacteria in a synthetic community

Ryan K. Fritts, Jordan T. Bird, Megan G. Behringer, Anna Lipzen, Joel Martin, Michael Lynch, James B. McKinlay

ISME JOURNAL (2020)

Editorial Material Environmental Sciences

I have a kit and I create worlds: synthetic ecology from synthetic genomes

James B. McKinlay

ENVIRONMENTAL MICROBIOLOGY REPORTS (2021)

Review Microbiology

Extracellular Metabolism Sets the Table for Microbial Cross-Feeding

Ryan K. Fritts, Alexandra L. McCully, James B. McKinlay

Summary: The transfer of nutrients between cells, known as cross-feeding, is a crucial aspect of microbial communities that impacts health and global biogeochemical cycles. Externalized molecules play a diverse role in promoting cross-feeding relationships, which can be characterized by a mix of cooperation and competition. The interplay between microbial physiology, environmental factors, and extracellular molecules shape the dynamics of cross-feeding interactions.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2021)

Article Microbiology

Complete Genome Sequence of Rhodopseudomonas palustris CGA0092 and Corrections to the R. palustris CGA009 Genome Sequence

Brittany E. E. Mazny, Olivia F. F. Sheff, Breah LaSarre, Anastasia McKinlay, James B. B. McKinlay

Summary: This article presents a new genome sequence for the derivative strain CGA0092 of Rhodopseudomonas palustris CGA009, which is a versatile model purple nonsulfur bacterium used for both fundamental and applied research.

MICROBIOLOGY RESOURCE ANNOUNCEMENTS (2023)

Article Biotechnology & Applied Microbiology

Nitrous oxide reduction by two partial denitrifying bacteria requires denitrification intermediates that cannot be respired

Breah LaSarre, Ryan Morlen, Gina C. Neumann, Caroline S. Harwood, James B. McKinlay

Summary: Partial denitrifiers can still be regulated by denitrification intermediates that they cannot use.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2023)

Article Microbiology

Fermentative Escherichia coli makes a substantial contribution to H2 production in coculture with phototrophic Rhodopseudomonas palustris

Amee A. Sangani, Alexandra L. McCully, Breah LaSarre, James B. McKinlay

FEMS MICROBIOLOGY LETTERS (2019)

Article Microbiology

Differential carbohydrate utilization and organic acid production by honey bee symbionts

Fredrick J. Lee, Kayla Miller, James B. McKinlay, Irene L. G. Newton

FEMS MICROBIOLOGY ECOLOGY (2018)

No Data Available