Phylogeny of the manta and devilrays (Chondrichthyes: mobulidae), with an updated taxonomic arrangement for the family

A comparative study of SVDquartets and other coalescent-based species tree estimation methods

(2015) Jed Chou et al.   BMC GENOMICS

A dated molecular phylogeny of manta and devil rays (Mobulidae) based on mitogenome and nuclear sequences

(2015) Marloes Poortvliet et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Likelihood-based tree reconstruction on a concatenation of aligned sequence data sets can be statistically inconsistent

(2015) Sebastien Roch et al.   THEORETICAL POPULATION BIOLOGY

Taxonomic assessment of sharks, rays and guitarfishes (Chondrichthyes: Elasmobranchii) from south-eastern Arabia, using the NADH dehydrogenase subunit 2 (NADH2) gene

(2015) Aaron C. Henderson et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Evolutionary history of the devilrays (Chondrichthyes: Myliobatiformes) from fossil and morphological inference

(2015) SYLVAIN ADNET et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Interrelationships of the durophagous stingrays (Batoidea: Myliobatidae)

(2014) Neil C. Aschliman   ENVIRONMENTAL BIOLOGY OF FISHES

The filter pads and filtration mechanisms of the devil rays: Variation at macro and microscopic scales

(2013) E.W. Misty Paig-Tran et al.   JOURNAL OF MORPHOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

A DNA Sequence–Based Approach To the Identification of Shark and Ray Species and Its Implications for Global Elasmobranch Diversity and Parasitology

(2012) G. J. P. Naylor et al.   BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY

Biology, ecology and conservation of the Mobulidae

(2012) L. I. E. Couturier et al.   JOURNAL OF FISH BIOLOGY

The genetic signature of recent speciation in manta rays (Manta alfredi and M. birostris)

(2012) Tom Kashiwagi et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The importance of research and public opinion to conservation management of sharks and rays: a synthesis

(2011) C. A. Simpfendorfer et al.   MARINE AND FRESHWATER RESEARCH

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries

(2011) Sheila Fisher et al.   GENOME BIOLOGY

De novo assembly and analysis of RNA-seq data

(2010) Gordon Robertson et al.   NATURE METHODS

De novo transcriptome assembly with ABySS

(2009) I. Birol et al.   BIOINFORMATICS

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

HaMStR: Profile hidden markov model based search for orthologs in ESTs

(2009) Ingo Ebersberger et al.   BMC EVOLUTIONARY BIOLOGY