Metagenomic analyses of bacterial endophytes associated with the phyllosphere of a Bt maize cultivar and its isogenic parental line from South Africa

PCR-denaturing gradient gel electrophoresis analysis of microbial community in soy-daddawa, a Nigerian fermented soybean (Glycine max (L.) Merr.) condiment

(2016) Obinna T. Ezeokoli et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

No adverse effects of transgenic maize on population dynamics of endophyticBacillus subtilisstrain B916-gfp

(2016) Chongsi Sun et al.   MicrobiologyOpen

Bacterial endophytes of sweet potato tuberous roots affected by the plant genotype and growth stage

(2015) Joana Montezano Marques et al.   APPLIED SOIL ECOLOGY

Endophytic bacterial community composition in wheat (Triticum aestivum) is determined by plant tissue type, developmental stage and soil nutrient availability

(2015) Rebekah J. Robinson et al.   PLANT AND SOIL

Effect of Bacillus thuringiensis (Bt) maize cultivation history on arbuscular mycorrhizal fungal colonization, spore abundance and diversity, and plant growth

(2014) Tanya E. Cheeke et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Global maize production, utilization, and consumption

(2014) Peter Ranum et al.   Annals of the New York Academy of Sciences

Different Effects of Transgenic Maize and Nontransgenic Maize on Nitrogen-Transforming Archaea and Bacteria in Tropical Soils

(2014) Simone Raposo Cotta et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Endophytic microbial community in two transgenic maize genotypes and in their near-isogenic non-transgenic maize genotype

(2014) Débora Alves Ferreira da Silva et al.   BMC MICROBIOLOGY

Analysis of Plant-Bacteria Interactions in Their Native Habitat: Bacterial Communities Associated with Wild Tobacco Are Independent of Endogenous Jasmonic Acid Levels and Developmental Stages

(2014) Rakesh Santhanam et al.   PLoS One

Shifts in diversity and community structure of endophytic bacteria and archaea across root, stem and leaf tissues in the common reed, Phragmites australis, along a salinity gradient in a marine tidal wetland of northern China

(2013) Bin Ma et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Rhizosphere microbiome assemblage is affected by plant development

(2013) Jacqueline M Chaparro et al.   ISME Journal

Temporal dynamics of microbial communities in the rhizosphere of two genetically modified (GM) maize hybrids in tropical agrosystems

(2012) Simone Raposo Cotta et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Genetically modified Bt maize lines containing cry3Bb1, cry1A105 or cry1Ab2 do not affect the structure and functioning of root-associated endophyte communities

(2012) Michaela Prischl et al.   APPLIED SOIL ECOLOGY

PANDAseq: paired-end assembler for illumina sequences

(2012) Andre P Masella et al.   BMC BIOINFORMATICS

Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties

(2012) Anja B Dohrmann et al.   ISME Journal

Diversity in global maize germplasm: Characterization and utilization

(2012) B M Prasanna   JOURNAL OF BIOSCIENCES

Plant Growth-Promoting Nitrogen-Fixing Enterobacteria Are in Association with Sugarcane Plants Growing in Guangxi, China

(2012) Li Lin et al.   MICROBES AND ENVIRONMENTS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Rice root-associated bacteria: insights into community structures across 10 cultivars

(2011) Pablo Rodrigo Hardoim et al.   FEMS MICROBIOLOGY ECOLOGY

Effect of bacterial inoculation, plant genotype and developmental stage on root-associated and endophytic bacterial communities in potato (Solanum tuberosum)

(2010) Fernando Dini Andreote et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves

(2010) Amanda J. Redford et al.   ENVIRONMENTAL MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Endophytic Colonization of Potato (Solanum tuberosum L.) by a Novel Competent Bacterial Endophyte, Pseudomonas putida Strain P9, and Its Effect on Associated Bacterial Communities

(2009) F. D. Andreote et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effects of plant genotype and growth stage on the structure of bacterial communities associated with potato (Solanum tuberosum L.)

(2008) Leo Van Overbeek et al.   FEMS MICROBIOLOGY ECOLOGY

Diversity of endophytic bacteria fromEucalyptusspecies seeds and colonization of seedlings byPantoea agglomerans

(2008) Anderson Ferreira et al.   FEMS MICROBIOLOGY LETTERS

Recent advances in molecular techniques to study microbial communities in food-associated matrices and processes

(2008) A JUSTE et al.   FOOD MICROBIOLOGY

Plant-driven selection of microbes

(2008) Anton Hartmann et al.   PLANT AND SOIL

Bacterial endophytes: recent developments and applications

(2007) Robert P. Ryan et al.   FEMS MICROBIOLOGY LETTERS

Rhizosphere microbial community structure at different maize plant growth stages and root locations

(2007) Lilia Cavaglieri et al.   MICROBIOLOGICAL RESEARCH