The application of powerful promoters to enhance gene expression in industrial microorganisms

Screening of a novel strong promoter by RNA sequencing and its application to H2 production in a hyperthermophilic archaeon

(2015) Seong Hyuk Lee et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Promoters inducible by aromatic amino acids and γ-aminobutyrate (GABA) for metabolic engineering applications in Saccharomyces cerevisiae

(2015) Sujin Kim et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Dynamic metabolic engineering: New strategies for developing responsive cell factories

(2015) Irene M. Brockman et al.   Biotechnology Journal

Genome-scale analysis reveals a role for NdgR in the thiol oxidative stress response in Streptomyces coelicolor

(2015) Ji-Nu Kim et al.   BMC GENOMICS

Engineering metabolism through dynamic control

(2015) Naveen Venayak et al.   CURRENT OPINION IN BIOTECHNOLOGY

Advances and current limitations in transcript-level control of gene expression

(2015) John M Leavitt et al.   CURRENT OPINION IN BIOTECHNOLOGY

Post-translational modifications as key regulators of bacterial metabolic fluxes

(2015) Tippapha Pisithkul et al.   CURRENT OPINION IN MICROBIOLOGY

Enhanced production of l-sorbose in an industrial Gluconobacter oxydans strain by identification of a strong promoter based on proteomics analysis

(2015) Yudong Hu et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Quorum-sensing linked RNA interference for dynamic metabolic pathway control in Saccharomyces cerevisiae

(2015) T.C. Williams et al.   METABOLIC ENGINEERING

Core promoters in transcription: old problem, new insights

(2015) Ananda L. Roy et al.   TRENDS IN BIOCHEMICAL SCIENCES

The development and characterization of synthetic minimal yeast promoters

(2015) Heidi Redden et al.   Nature Communications

Systematic Identification of a Panel of Strong Constitutive Promoters from Streptomyces albus

(2015) Yunzi Luo et al.   ACS Synthetic Biology

Dynamic metabolic engineering: New strategies for developing responsive cell factories

(2015) Irene M. Brockman et al.   Biotechnology Journal

Atmospheric and room temperature plasma (ARTP) as a new powerful mutagenesis tool

(2014) Xue Zhang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Synthetic promoter libraries for Corynebacterium glutamicum

(2014) Jakob Vang Rytter et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Toehold Switches: De-Novo-Designed Regulators of Gene Expression

(2014) Alexander A. Green et al.   CELL

Distinct Promoters Affect Pyrroloquinoline Quinone Production in Recombinant Escherichia coli and Klebsiella pneumoniae

(2014) Jiguo Sun et al.   CURRENT MICROBIOLOGY

Light-responsive control of bacterial gene expression: precise triggering of the lac promoter activity using photocaged IPTG

(2014) Dennis Binder et al.   Integrative Biology

Establishment of a novel gene expression method, BICES (biomass-inducible chromosome-based expression system), and its application to the production of 2,3-butanediol and acetoin

(2014) Nobutaka Nakashima et al.   METABOLIC ENGINEERING

Production of recombinant protein by a novel oxygen-induced system in Escherichia coli

(2014) Antonino Baez et al.   Microbial Cell Factories

Regulation of gene expression at low temperature: role of cold-inducible promoters

(2014) A. K. Singh et al.   MICROBIOLOGY-SGM

The Eukaryotic Promoter Database: expansion of EPDnew and new promoter analysis tools

(2014) René Dreos et al.   NUCLEIC ACIDS RESEARCH

A split intein T7 RNA polymerase for transcriptional AND-logic

(2014) Yolanda Schaerli et al.   NUCLEIC ACIDS RESEARCH

Modular Optimization of Heterologous Pathways for De Novo Synthesis of (2S)-Naringenin in Escherichia coli

(2014) Junjun Wu et al.   PLoS One

Improving fatty acids production by engineering dynamic pathway regulation and metabolic control

(2014) P. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Design and Kinetic Analysis of a Hybrid Promoter–Regulator System for Malonyl-CoA Sensing in Escherichia coli

(2013) Peng Xu et al.   ACS Chemical Biology

Synthetic Promoters Functional in Francisella novicida and Escherichia coli

(2013) Ralph L. McWhinnie et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Isolation of fully synthetic promoters for high-level gene expression inCorynebacterium glutamicum

(2013) Sung Sun Yim et al.   BIOTECHNOLOGY AND BIOENGINEERING

Development and characterization of AND-gate dynamic controllers with a modular synthetic GAL1 core promoter inSaccharomyces cerevisiae

(2013) Wei Suong Teo et al.   BIOTECHNOLOGY AND BIOENGINEERING

Promoter activity dynamics in the lag phase of Escherichia coli

(2013) Daniel Madar et al.   BMC Systems Biology

Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression

(2013) Lei S. Qi et al.   CELL

Novel fermentation processes for manufacturing plant natural products

(2013) Jingwen Zhou et al.   CURRENT OPINION IN BIOTECHNOLOGY

Transcriptomics in the RNA-seq era

(2013) Paul A McGettigan   CURRENT OPINION IN CHEMICAL BIOLOGY

Multivariate modular metabolic engineering of Escherichia coli to produce resveratrol from l-tyrosine

(2013) Junjun Wu et al.   JOURNAL OF BIOTECHNOLOGY

Design, construction and characterisation of a synthetic promoter library for fine-tuned gene expression in actinomycetes

(2013) Theresa Siegl et al.   METABOLIC ENGINEERING

Promoters maintain their relative activity levels under different growth conditions

(2013) L. Keren et al.   Molecular Systems Biology

High-Throughput Identification of Promoters and Screening of Highly Active Promoter-5′-UTR DNA Region with Different Characteristics from Bacillus thuringiensis

(2013) Jieping Wang et al.   PLoS One

Multi-Input Regulation and Logic with T7 Promoters in Cells and Cell-Free Systems

(2013) Sukanya Iyer et al.   PLoS One

Causes and Effects of N-Terminal Codon Bias in Bacterial Genes

(2013) D. B. Goodman et al.   SCIENCE

Modular optimization of multi-gene pathways for fatty acids production in E. coli

(2013) Peng Xu et al.   Nature Communications

Evolved Quorum Sensing Regulator, LsrR, for Altered Switching Functions

(2013) Bryn L. Adams et al.   ACS Synthetic Biology

Genome-scale Analysis of Escherichia coli FNR Reveals Complex Features of Transcription Factor Binding

(2013) Kevin S. Myers et al.   PLoS Genetics

Controlling promoter strength and regulation inSaccharomyces cerevisiaeusing synthetic hybrid promoters

(2012) John Blazeck et al.   BIOTECHNOLOGY AND BIOENGINEERING

Promoter engineering: Recent advances in controlling transcription at the most fundamental level

(2012) John Blazeck et al.   Biotechnology Journal

Predictive design of mRNA translation initiation region to control prokaryotic translation efficiency

(2012) Sang Woo Seo et al.   METABOLIC ENGINEERING

Metabolic engineering of Escherichia coli for (2S)-pinocembrin production from glucose by a modular metabolic strategy

(2012) Junjun Wu et al.   METABOLIC ENGINEERING

Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids

(2012) Fuzhong Zhang et al.   NATURE BIOTECHNOLOGY

Digital RNA sequencing minimizes sequence-dependent bias and amplification noise with optimized single-molecule barcodes

(2012) K. Shiroguchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tuning Gene Expression in Yarrowia lipolytica by a Hybrid Promoter Approach

(2011) John Blazeck et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Archaeal RNA polymerase and transcription regulation

(2011) Sung-Hoon Jun et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Recent advances in the understanding of archaeal transcription

(2011) Dina Grohmann et al.   CURRENT OPINION IN MICROBIOLOGY

Transcriptional Regulation inSaccharomyces cerevisiae: Transcription Factor Regulation and Function, Mechanisms of Initiation, and Roles of Activators and Coactivators

(2011) Steven Hahn et al.   GENETICS

Mechanism of Bacterial Transcription Initiation: RNA Polymerase - Promoter Binding, Isomerization to Initiation-Competent Open Complexes, and Initiation of RNA Synthesis

(2011) Ruth M. Saecker et al.   JOURNAL OF MOLECULAR BIOLOGY

Genome-scale metabolic network modeling results in minimal interventions that cooperatively force carbon flux towards malonyl-CoA

(2011) Peng Xu et al.   METABOLIC ENGINEERING

Quantitative analysis and engineering of fatty acid biosynthesis in E. coli

(2010) Tiangang Liu et al.   METABOLIC ENGINEERING

Isoprenoid Pathway Optimization for Taxol Precursor Overproduction in Escherichia coli

(2010) P. K. Ajikumar et al.   SCIENCE

Increased Malonyl Coenzyme A Biosynthesis by Tuning the Escherichia coli Metabolic Network and Its Application to Flavanone Production

(2009) Z. L. Fowler et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Synthetic protein scaffolds provide modular control over metabolic flux

(2009) John E Dueber et al.   NATURE BIOTECHNOLOGY

Automated design of synthetic ribosome binding sites to control protein expression

(2009) Howard M Salis et al.   NATURE BIOTECHNOLOGY

Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli

(2009) Alfredo Mendoza-Vargas et al.   PLoS One

Dynamic metabolic engineering for increasing bioprocess productivity

(2008) Nikolaos Anesiadis et al.   METABOLIC ENGINEERING

Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels

(2008) Shota Atsumi et al.   NATURE