Salmonella Typhi genomics: envisaging the future of typhoid eradication

An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid

(2016) Vanessa K. Wong et al.   Nature Communications

Global MLST of Salmonella Typhi Revisited in Post-genomic Era: Genetic Conservation, Population Structure, and Comparative Genomics of Rare Sequence Types

(2016) Kien-Pong Yap et al.   Frontiers in Microbiology

The emergence and outbreak of multidrug-resistant typhoid fever in China

(2016) Meiying Yan et al.   Emerging Microbes & Infections

Pseudogenization of sopA and sopE2 is functionally linked and contributes to virulence of Salmonella enterica serovar Typhi

(2015) L.M. Valenzuela et al.   INFECTION GENETICS AND EVOLUTION

Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events

(2015) Vanessa K Wong et al.   NATURE GENETICS

The Hd, Hj, and Hz66 flagella variants of Salmonella enterica serovar Typhi modify host responses and cellular interactions

(2015) Fernanda Schreiber et al.   Scientific Reports

blaCTX-M-I group extended spectrum beta lactamase-producing Salmonella typhi from hospitalized patients in Lagos, Nigeria

(2015) Kabiru Olusegun Akinyemi et al.   Infection and Drug Resistance

Variable Responses to Carbon Utilization between Planktonic and Biofilm Cells of a Human Carrier Strain of Salmonella enterica Serovar Typhi

(2015) Kalaivani Kalai Chelvam et al.   PLoS One

Chromosome-Mediated Multidrug Resistance in Salmonella enterica Serovar Typhi

(2014) Chien-Shun Chiou et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Comparative genomics of closely related Salmonella enterica serovar Typhi strains reveals genome dynamics and the acquisition of novel pathogenic elements

(2014) Kien-Pong Yap et al.   BMC GENOMICS

Salmonella Typhi shdA: Pseudogene or allelic variant?

(2014) I.M. Urrutia et al.   INFECTION GENETICS AND EVOLUTION

Genomic Dissection of Travel-Associated Extended-Spectrum-Beta-Lactamase-Producing Salmonella enterica Serovar Typhi Isolates Originating from the Philippines: a One-Off Occurrence or a Threat to Effective Treatment of Typhoid Fever?

(2014) Rene S. Hendriksen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Genomic Signature of Multidrug-Resistant Salmonella enterica Serovar Typhi Isolates Related to a Massive Outbreak in Zambia between 2010 and 2012

(2014) Rene S. Hendriksen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Genome dynamics and evolution of Salmonella Typhi strains from the typhoid-endemic zones

(2014) Ramani Baddam et al.   Scientific Reports

Genetic Fine Structure of a Salmonella enterica Serovar Typhi Strain Associated with the 2005 Outbreak of Typhoid Fever in Kelantan, Malaysia

(2012) R. Baddam et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence and Comparative Pathogenomics Analysis of a Salmonella enterica Serovar Typhi Strain Associated with a Typhoid Carrier in Malaysia

(2012) K.-P. Yap et al.   JOURNAL OF BACTERIOLOGY

Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhi P-stx-12

(2012) S. Y. Ong et al.   JOURNAL OF BACTERIOLOGY

Insights from the Genome Sequence of a Salmonella enterica Serovar Typhi Strain Associated with a Sporadic Case of Typhoid Fever in Malaysia

(2012) Kien-Pong Yap et al.   JOURNAL OF BACTERIOLOGY

Whole-Genome Sequences and Comparative Genomics of Salmonella enterica Serovar Typhi Isolates from Patients with Fatal and Nonfatal Typhoid Fever in Papua New Guinea

(2012) Ramani Baddam et al.   JOURNAL OF BACTERIOLOGY

Disability-adjusted life years (DALYs) for 291 diseases and injuries in 21 regions, 1990–2010: a systematic analysis for the Global Burden of Disease Study 2010

(2012) Christopher J L Murray et al.   LANCET

Variable Carbon Catabolism among Salmonella enterica Serovar Typhi Isolates

(2012) Lay Ching Chai et al.   PLoS One

The new multicomponent vaccine against meningococcal serogroup B, 4CMenB: Immunological, functional and structural characterization of the antigens

(2012) Davide Serruto et al.   VACCINE

Genome sequencing and analysis of Salmonella enterica serovar Typhi strain CR0063 representing a carrier individual during an outbreak of typhoid fever in Kelantan, Malaysia

(2012) Ramani Baddam et al.   Gut Pathogens

Typhoid fever and paratyphoid fever: Systematic review to estimate global morbidity and mortality for 2010

(2012) Geoffrey C. Buckle et al.   Journal of Global Health

Temporal Fluctuation of Multidrug Resistant Salmonella Typhi Haplotypes in the Mekong River Delta Region of Vietnam

(2011) Kathryn E. Holt et al.   PLoS Neglected Tropical Diseases

Emergence of a Globally Dominant IncHI1 Plasmid Type Associated with Multiple Drug Resistant Typhoid

(2011) Kathryn E. Holt et al.   PLoS Neglected Tropical Diseases

Bacterial epidemiology and biology - lessons from genome sequencing

(2011) Julian Parkhill et al.   GENOME BIOLOGY

High-throughput bacterial SNP typing identifies distinct clusters of SalmonellaTyphi causing typhoid in Nepalese children

(2010) Kathryn E Holt et al.   BMC INFECTIOUS DISEASES

Reverse Vaccinology: Developing Vaccines in the Era of Genomics

(2010) Alessandro Sette et al.   IMMUNITY

Pseudogene accumulation in the evolutionary histories of Salmonella enterica serovars Paratyphi A and Typhi

(2009) Kathryn E Holt et al.   BMC GENOMICS

Global Trends in Typhoid and Paratyphoid Fever

(2009) John A. Crump et al.   CLINICAL INFECTIOUS DISEASES

High-Throughput Genotyping of Salmonella enterica Serovar Typhi Allowing Geographical Assignment of Haplotypes and Pathotypes within an Urban District of Jakarta, Indonesia

(2008) S. Baker et al.   JOURNAL OF CLINICAL MICROBIOLOGY

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

(2008) Kathryn E Holt et al.   NATURE GENETICS