iPSCs and fibroblast subclones from the same fibroblast population contain comparable levels of sequence variations

Whole-genome mutational burden analysis of three pluripotency induction methods

(2016) Kunal Bhutani et al.   Nature Communications

Mutational History of a Human Cell Lineage from Somatic to Induced Pluripotent Stem Cells

(2016) Foad J. Rouhani et al.   PLoS Genetics

Somatic mosaicism for copy-neutral loss of heterozygosity and DNA copy number variations in the human genome

(2015) Olga Žilina et al.   BMC GENOMICS

Increased Risk of Genetic and Epigenetic Instability in Human Embryonic Stem Cells Associated with Specific Culture Conditions

(2015) Ibon Garitaonandia et al.   PLoS One

Effects of Integrating and Non-Integrating Reprogramming Methods on Copy Number Variation and Genomic Stability of Human Induced Pluripotent Stem Cells

(2015) Xiangjin Kang et al.   PLoS One

Single-Cell Genetic Analysis Using Automated Microfluidics to Resolve Somatic Mosaicism

(2015) Keith E. Szulwach et al.   PLoS One

Targeted correction of RUNX1 mutation in FPD patient-specific induced pluripotent stem cells rescues megakaryopoietic defects

(2014) J. P. Connelly et al.   BLOOD

Somatic mutations, genome mosaicism, cancer and aging

(2014) Jan Vijg   CURRENT OPINION IN GENETICS & DEVELOPMENT

Passage Number is a Major Contributor to Genomic Structural Variations in Mouse iPSCs

(2014) Pengfei Liu et al.   STEM CELLS

Somatic Mosaicism in the Human Genome

(2014) Donald Freed et al.   Genes

Induced Pluripotent Stem Cell Generation-Associated Point Mutations Arise during the Initial Stages of the Conversion of These Cells

(2014) Mayumi Sugiura et al.   Stem Cell Reports

Shimmer: detection of genetic alterations in tumors using next-generation sequence data

(2013) Nancy F. Hansen et al.   BIOINFORMATICS

Defective telomere elongation and hematopoiesis from telomerase-mutant aplastic anemia iPSCs

(2013) Thomas Winkler et al.   JOURNAL OF CLINICAL INVESTIGATION

Detectable Clonal Mosaicism in the Human Genome

(2013) Mitchell J. Machiela et al.   SEMINARS IN HEMATOLOGY

Analysis of protein-coding mutations in hiPSCs and their possible role during somatic cell reprogramming

(2013) Sergio Ruiz et al.   Nature Communications

Genomic Analysis of hESC Pedigrees Identifies De Novo Mutations and Enables Determination of the Timing and Origin of Mutational Events

(2013) Dalit Ben-Yosef et al.   Cell Reports

Low Incidence of DNA Sequence Variation in Human Induced Pluripotent Stem Cells Generated by Nonintegrating Plasmid Expression

(2012) Linzhao Cheng et al.   Cell Stem Cell

Background Mutations in Parental Cells Account for Most of the Genetic Heterogeneity of Induced Pluripotent Stem Cells

(2012) Margaret A. Young et al.   Cell Stem Cell

Screening of human pluripotent stem cells using CGH and FISH reveals low-grade mosaic aneuploidy and a recurrent amplification of chromosome 1q

(2012) Michal Dekel-Naftali et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Somatic copy number mosaicism in human skin revealed by induced pluripotent stem cells

(2012) Alexej Abyzov et al.   NATURE

Reprogramming to Pluripotency Can Conceal Somatic Cell Chromosomal Instability

(2012) Masakazu Hamada et al.   PLoS Genetics

Genomic instability in induced stem cells

(2011) C E Pasi et al.   CELL DEATH AND DIFFERENTIATION

Genome Sequencing of Mouse Induced Pluripotent Stem Cells Reveals Retroelement Stability and Infrequent DNA Rearrangement during Reprogramming

(2011) Aaron R. Quinlan et al.   Cell Stem Cell

Dynamic Changes in the Copy Number of Pluripotency and Cell Proliferation Genes in Human ESCs and iPSCs during Reprogramming and Time in Culture

(2011) Louise C. Laurent et al.   Cell Stem Cell

Somatic coding mutations in human induced pluripotent stem cells

(2011) Athurva Gore et al.   NATURE

Copy number variation and selection during reprogramming to pluripotency

(2011) Samer M. Hussein et al.   NATURE

Elevated Coding Mutation Rate During the Reprogramming of Human Somatic Cells into Induced Pluripotent Stem Cells

(2011) Junfeng Ji et al.   STEM CELLS

Identification and Classification of Chromosomal Aberrations in Human Induced Pluripotent Stem Cells

(2010) Yoav Mayshar et al.   Cell Stem Cell

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS