Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA

Identification of a rhodanese-like protein involved in thiouridine biosynthesis inThermus thermophilustRNA

(2016) Naoki Shigi et al.   FEBS LETTERS

A [3Fe-4S] cluster is required for tRNA thiolation in archaea and eukaryotes

(2016) Yuchen Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Crystallographic study of the 2-thioribothymidine-synthetic complex TtuA–TtuB fromThermus thermophilus

(2016) Minghao Chen et al.   Acta Crystallographica Section F-Structural Biology Communications

Chemistry enters nucleic acids biology: Enzymatic mechanisms of RNA modification

(2014) S. Boschi-Muller et al.   BIOCHEMISTRY-MOSCOW

The putative tRNA 2-thiouridine synthetase Ncs6 is an essential sulfur carrier inMethanococcus maripaludis

(2014) Yuchen Liu et al.   FEBS LETTERS

ChlR Protein ofSynechococcussp. PCC 7002 Is a Transcription Activator That Uses an Oxygen-sensitive [4Fe-4S] Cluster to Control Genes involved in Pigment Biosynthesis

(2014) Marcus Ludwig et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

TtcA a new tRNA-thioltransferase with an Fe-S cluster

(2014) Denis Bouvier et al.   NUCLEIC ACIDS RESEARCH

Biosynthesis and functions of sulfur modifications in tRNA

(2014) Naoki Shigi   Frontiers in Genetics

Phaser.MRage: automated molecular replacement

(2013) Gábor Bunkóczi et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Two Fe-S clusters catalyze sulfur insertion by radical-SAM methylthiotransferases

(2013) Farhad Forouhar et al.   Nature Chemical Biology

Crystallographic and mutational studies on the tRNA thiouridine synthetase TtuA

(2013) Hirofumi Nakagawa et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Regulation of the intersubunit ammonia tunnel inMycobacterium tuberculosisglutamine-dependent NAD+synthetase

(2012) Watchalee Chuenchor et al.   BIOCHEMICAL JOURNAL

Biosynthesis of 4-Thiouridine in tRNA in the Methanogenic ArchaeonMethanococcus maripaludis

(2012) Yuchen Liu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MODOMICS: a database of RNA modification pathways—2013 update

(2012) Magdalena A. Machnicka et al.   NUCLEIC ACIDS RESEARCH

Role of the ubiquitin-like protein Urm1 as a noncanonical lysine-directed protein modifier

(2011) Annemarthe G. Van der Veen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Integration, scaling, space-group assignment and post-refinement

(2010) Wolfgang Kabsch   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

PHENIX: a comprehensive Python-based system for macromolecular structure solution

(2010) Paul D. Adams et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Ubiquitin-related modifier Urm1 acts as a sulphur carrier in thiolation of eukaryotic transfer RNA

(2009) Sebastian Leidel et al.   NATURE

Structural basis for translational fidelity ensured by transfer RNA lysidine synthetase

(2009) Kotaro Nakanishi et al.   NATURE

Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions

(2009) Akiko Noma et al.   NUCLEIC ACIDS RESEARCH

Common thiolation mechanism in the biosynthesis of tRNA thiouridine and sulphur-containing cofactors

(2008) Naoki Shigi et al.   EMBO JOURNAL

Thio-modification of Yeast Cytosolic tRNA Requires a Ubiquitin-related System That Resembles Bacterial Sulfur Transfer Systems

(2008) Yumi Nakai et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The conserved Wobble uridine tRNA thiolase Ctu1-Ctu2 is required to maintain genome integrity

(2008) M. Dewez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A functional proteomics approach links the ubiquitin-related modifier Urm1 to a tRNA modification pathway

(2008) C. D. Schlieker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Crystal Structure of a Molybdopterin Synthase−Precursor Z Complex:  Insight into Its Sulfur Transfer Mechanism and Its Role in Molybdenum Cofactor Deficiency†,‡

(2007) Juma N. Daniels et al.   BIOCHEMISTRY