Bacterial and diazotrophic diversities of endophytes in Dendrobium catenatum determined through barcoded pyrosequencing

Erratum: Erratum: A pyrosequencing insight into sprawling bacterial diversity and community dynamics in decaying deadwood logs of Fagus sylvatica and Picea abies

(2016) Björn Hoppe et al.   Scientific Reports

Delftia tsuruhatensisWGR-UOM-BT1, a novel rhizobacterium with PGPR properties fromRauwolfia serpentina(L.) Benth.exKurz also suppresses fungal phytopathogens by producing a new antibiotic-AMTM

(2015) S.P. Prasannakumar et al.   LETTERS IN APPLIED MICROBIOLOGY

Symbiotic in vitro seed propagation of Dendrobium: fungal and bacterial partners and their influence on plant growth and development

(2015) Jaime A. Teixeira da Silva et al.   PLANTA

A large diversity of non-rhizobial endophytes found in legume root nodules in Flanders (Belgium)

(2015) Sofie E. De Meyer et al.   SOIL BIOLOGY & BIOCHEMISTRY

Growth-promotingSphingomonas paucimobilis ZJSH1 associated withDendrobium officinalethrough phytohormone production and nitrogen fixation

(2014) Suijuan Yang et al.   Microbial Biotechnology

Design and application of specific 16S rDNA-targeted primers for assessing endophytic diversity in Dendrobium officinale using nested PCR-DGGE

(2013) Jie Yu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Linking the gut microbiota to human health

(2013) Virginia Robles Alonso et al.   BRITISH JOURNAL OF NUTRITION

Bacterial Communities Associated with the Leaves and the Roots of Arabidopsis thaliana

(2013) Natacha Bodenhausen et al.   PLoS One

Host Genotype Shapes the Foliar Fungal Microbiome of Balsam Poplar (Populus balsamifera)

(2013) Miklós Bálint et al.   PLoS One

Microbial diversity in the floral nectar of sevenEpipactis(Orchidaceae) species

(2013) Hans Jacquemyn et al.   MicrobiologyOpen

Genetic diversity, community structure and distribution of rhizobia in the root nodules of Caragana spp. from arid and semi-arid alkaline deserts, in the north of China

(2012) Mao Li et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

(2012) Daniel McDonald et al.   GigaScience

Phylogeny of members of the Frankia genus based on gyrB, nifH and glnII sequences

(2011) Imen Nouioui et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Delftia sp. JD2: a potential Cr(VI)-reducing agent with plant growth-promoting activity

(2010) María A. Morel et al.   ARCHIVES OF MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing

(2010) Pei-Yuan Qian et al.   ISME Journal

Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere

(2010) Claudia Knief et al.   ISME Journal

Diversity of nitrogenase (nifH) genes pool in soybean field soil after continuous and rotational cropping

(2010) C. H. Xiao et al.   JOURNAL OF BASIC MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Organic acid production in vitro and plant growth promotion in maize under controlled environment by phosphate-solubilizing fluorescent Pseudomonas

(2009) Pratibha Vyas et al.   BMC MICROBIOLOGY

Occurrence and diversity of nitrogen-fixingSphingomonasbacteria associated with rice plants grown in Brazil

(2009) Sandy Sampaio Videira et al.   FEMS MICROBIOLOGY LETTERS

Horizontal transfer of the nitrogen fixation gene cluster in the cyanobacterium Microcoleus chthonoplastes

(2009) Henk Bolhuis et al.   ISME Journal

Interaction between a Dark Septate Endophytic Isolate fromDendrobiumsp. and Roots ofD. nobileSeedlings

(2009) Xiao-Qiang Hou et al.   Journal of Integrative Plant Biology

An rpoD-based PCR procedure for the identification of Pseudomonas species and for their detection in environmental samples

(2009) Magdalena Mulet et al.   MOLECULAR AND CELLULAR PROBES

Microbial community structure and its functional implications

(2009) Jed A. Fuhrman   NATURE

Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine

(2009) Marcus J. Claesson et al.   PLoS One

Community proteogenomics reveals insights into the physiology of phyllosphere bacteria

(2009) N. Delmotte et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cultivation-Independent Characterization of Methylobacterium Populations in the Plant Phyllosphere by Automated Ribosomal Intergenic Spacer Analysis

(2008) C. Knief et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genetic and metabolic diversity of pink-pigmented facultative methylotrophs in phyllosphere of tropical plants

(2008) D. Balachandar et al.   BRAZILIAN JOURNAL OF MICROBIOLOGY

Next-generation DNA sequencing

(2008) Jay Shendure et al.   NATURE BIOTECHNOLOGY

Spatial scaling of functional gene diversity across various microbial taxa

(2008) J. Zhou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Screening of free-living rhizospheric bacteria for their multiple plant growth promoting activities

(2006) Farah Ahmad et al.   MICROBIOLOGICAL RESEARCH