Metabolite profiling of non-sterile rhizosphere soil

Spore Density Determines Infection Strategy by the Plant Pathogenic FungusPlectosphaerella cucumerina

(2016) Pierre Pétriacq et al.   PLANT PHYSIOLOGY

NAD Acts as an Integral Regulator of Multiple Defense Layers

(2016) Pierre Pétriacq et al.   PLANT PHYSIOLOGY

Engineering the Rhizosphere

(2016) Yves Dessaux et al.   TRENDS IN PLANT SCIENCE

New Methods To Unravel Rhizosphere Processes

(2016) Eva Oburger et al.   TRENDS IN PLANT SCIENCE

Metabolomics in the Rhizosphere: Tapping into Belowground Chemical Communication

(2016) Nicole M. van Dam et al.   TRENDS IN PLANT SCIENCE

Unearthing microbial diversity of Taxus rhizosphere via MiSeq high-throughput amplicon sequencing and isolate characterization

(2016) Da Cheng Hao et al.   Scientific Reports

Impact of a Bacterial Volatile 2,3-Butanediol on Bacillus subtilis Rhizosphere Robustness

(2016) Hwe-Su Yi et al.   Frontiers in Microbiology

The Effect of Root Exudate 7,4′-Dihydroxyflavone and Naringenin on Soil Bacterial Community Structure

(2016) Márton Szoboszlay et al.   PLoS One

Evolutionary Divergences in Root Exudate Composition among Ecologically-Contrasting Helianthus Species

(2016) Alan W. Bowsher et al.   PLoS One

Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

(2015) Davide Bulgarelli et al.   Cell Host & Microbe

Non-targeted profiling of semi-polar metabolites in Arabidopsis root exudates uncovers a role for coumarin secretion and lignification during the local response to phosphate limitation

(2015) Jörg Ziegler et al.   JOURNAL OF EXPERIMENTAL BOTANY

Increased soil phosphorus availability induced by faba bean root exudation stimulates root growth and phosphorus uptake in neighbouring maize

(2015) Deshan Zhang et al.   NEW PHYTOLOGIST

MetaboAnalyst 3.0—making metabolomics more meaningful

(2015) Jianguo Xia et al.   NUCLEIC ACIDS RESEARCH

Untargeted soil metabolomics methods for analysis of extractable organic matter

(2015) Tami L. Swenson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Plant perception of β-aminobutyric acid is mediated by an aspartyl-tRNA synthetase

(2014) Estrella Luna et al.   Nature Chemical Biology

Profiling of secondary metabolites in root exudates of Arabidopsis thaliana

(2014) Nadine Strehmel et al.   PHYTOCHEMISTRY

The importance of a sterile rhizosphere when phenotyping for root exudation

(2014) René C. P. Kuijken et al.   PLANT AND SOIL

Targeting novel chemical and constitutive primed metabolites againstPlectosphaerella cucumerina

(2014) Jordi Gamir et al.   PLANT JOURNAL

Root-induced changes in nutrient cycling in forests depend on exudation rates

(2014) Huajun Yin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Disruption of the ammonium transporter AMT1.1 alters basal defenses generating resistance against Pseudomonas syringae and Plectosphaerella cucumerina

(2014) Victoria Pastor et al.   Frontiers in Plant Science

Methods of collection of plant root exudates in relation to plant metabolism and purpose: A review

(2013) Valerie Vranova et al.   JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE

Mycorrhiza-induced resistance: more than the sum of its parts?

(2013) Duncan D. Cameron et al.   TRENDS IN PLANT SCIENCE

The rhizosphere revisited: root microbiomics

(2013) Peter A. H. M. Bakker et al.   Frontiers in Plant Science

MarVis: a tool for clustering and visualization of metabolic biomarkers

(2012) Alexander Kaever et al.   BMC BIOINFORMATICS

Response to water stress of soil enzymes and root exudates from drought and non-drought tolerant corn hybrids at different growth stages

(2012) Fengbin Song et al.   CANADIAN JOURNAL OF SOIL SCIENCE

Evaluation of a novel tool for sampling root exudates from soil-grown plants compared to conventional techniques

(2012) Eva Oburger et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

MarVis-Filter: Ranking, Filtering, Adduct and Isotope Correction of Mass Spectrometry Data

(2012) Alexander Kaever et al.   JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY

Ultra-high pressure liquid chromatography–mass spectrometry for plant metabolomics: A systematic comparison of high-resolution quadrupole-time-of-flight and single stage Orbitrap mass spectrometers

(2012) Gaetan Glauser et al.   JOURNAL OF CHROMATOGRAPHY A

The role of flavonoids in root-rhizosphere signalling: opportunities and challenges for improving plant-microbe interactions

(2012) S. Hassan et al.   JOURNAL OF EXPERIMENTAL BOTANY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Metabolomics reveals herbivore-induced metabolites of resistance and susceptibility in maize leaves and roots

(2012) GUILLAUME MARTI et al.   PLANT CELL AND ENVIRONMENT

Microbe-Associated Molecular Patterns-Triggered Root Responses Mediate Beneficial Rhizobacterial Recruitment in Arabidopsis

(2012) V. Lakshmanan et al.   PLANT PHYSIOLOGY

Benzoxazinoids in Root Exudates of Maize Attract Pseudomonas putida to the Rhizosphere

(2012) Andrew L. Neal et al.   PLoS One

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Citramalic acid and salicylic acid in sugar beet root exudates solubilize soil phosphorus

(2011) Reza Khorassani et al.   BMC PLANT BIOLOGY

A specialist root herbivore exploits defensive metabolites to locate nutritious tissues

(2011) Christelle A. M. Robert et al.   ECOLOGY LETTERS

Effects of selected root exudate components on soil bacterial communities

(2011) Shengjing Shi et al.   FEMS MICROBIOLOGY ECOLOGY

RHIZOtest: A plant-based biotest to account for rhizosphere processes when assessing copper bioavailability

(2010) Matthieu N. Bravin et al.   ENVIRONMENTAL POLLUTION

Levels of antioxidants and nutraceuticals in basil grown in hydroponics and soil

(2010) Cristina Sgherri et al.   FOOD CHEMISTRY

The response of barley to salinity stress differs between hydroponic and soil systems

(2010) Ehsan Tavakkoli et al.   FUNCTIONAL PLANT BIOLOGY

Copper availability and bioavailability are controlled by rhizosphere pH in rape grown in an acidic Cu-contaminated soil

(2009) Valérie Chaignon et al.   ENVIRONMENTAL POLLUTION

Strategies and methods for studying the rhizosphere—the plant science toolbox

(2009) Günter Neumann et al.   PLANT AND SOIL

Carbon flow in the rhizosphere: carbon trading at the soil–root interface

(2009) D. L. Jones et al.   PLANT AND SOIL

Regulation and function of root exudates

(2009) DAYAKAR V. BADRI et al.   PLANT CELL AND ENVIRONMENT

New approach for capturing soluble root exudates in forest soils

(2008) Richard P. Phillips et al.   FUNCTIONAL ECOLOGY

Root-Secreted Malic Acid Recruits Beneficial Soil Bacteria

(2008) T. Rudrappa et al.   PLANT PHYSIOLOGY