The high-quality genome of Brassica napus cultivar ‘ZS11’ reveals the introgression history in semi-winter morphotype

Assembly and comparison of two closely related Brassica napus genomes

(2017) Philipp E. Bayer et al.   PLANT BIOTECHNOLOGY JOURNAL

Mapping of homoeologous chromosome exchanges influencing quantitative trait variation in Brassica napus

(2017) Anna Stein et al.   PLANT BIOTECHNOLOGY JOURNAL

Post-polyploidisation morphotype diversification associates with gene copy number variation

(2017) Sarah Schiessl et al.   Scientific Reports

The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection

(2016) Jinghua Yang et al.   NATURE GENETICS

Identification of stable QTLs for seed oil content by combined linkage and association mapping in Brassica napus

(2016) Fengming Sun et al.   PLANT SCIENCE

The Impact of Open Pollination on the Structural Evolutionary Dynamics, Meiotic Behavior, and Fertility of Resynthesized Allotetraploid Brassica napus L.

(2016) Mathieu Rousseau-Gueutin et al.   G3-Genes Genomes Genetics

Population Genomic Analysis Reveals Differential Evolutionary Histories and Patterns of Diversity across Subgenomes and Subpopulations of Brassica napus L.

(2016) Elodie Gazave et al.   Frontiers in Plant Science

QTL meta-analysis of root traits in Brassica napus under contrasting phosphorus supply in two growth systems

(2016) Ying Zhang et al.   Scientific Reports

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution

(2015) Fuguang Li et al.   NATURE BIOTECHNOLOGY

ALLMAPS: robust scaffold ordering based on multiple maps

(2015) Haibao Tang et al.   GENOME BIOLOGY

A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome

(2015) Jarrod A Chapman et al.   GENOME BIOLOGY

A combined linkage and regional association mapping validation and fine mapping of two major pleiotropic QTLs for seed weight and silique length in rapeseed (Brassica napus L.)

(2014) Na Li et al.   BMC PLANT BIOLOGY

Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

(2014) B. Chalhoub et al.   SCIENCE

Structural and functional partitioning of bread wheat chromosome 3B

(2014) F. Choulet et al.   SCIENCE

Capturing sequence variation among flowering-time regulatory gene homologs in the allopolyploid crop species Brassica napus

(2014) Sarah Schiessl et al.   Frontiers in Plant Science

Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea

(2014) Isobel AP Parkin et al.   GENOME BIOLOGY

Identification of genome-wide single nucleotide polymorphisms in allopolyploid crop Brassica napus

(2013) Shunmou Huang et al.   BMC GENOMICS

High-density SNP-based genetic map development and linkage disequilibrium assessment in Brassica napus L

(2013) Régine Delourme et al.   BMC GENOMICS

A High-Density SNP Map for Accurate Mapping of Seed Fibre QTL in Brassica napus L

(2013) Liezhao Liu et al.   PLoS One

The genome of the pear (Pyrus bretschneideri Rehd.)

(2012) J. Wu et al.   GENOME RESEARCH

Non-random distribution of extensive chromosome rearrangements in Brassica napus depends on genome organization

(2012) Stéphane D. Nicolas et al.   PLANT JOURNAL

Comparative Analysis of FLC Homologues in Brassicaceae Provides Insight into Their Role in the Evolution of Oilseed Rape

(2012) Xiaoxiao Zou et al.   PLoS One

Molecular mapping of qualitative and quantitative loci for resistance to Leptosphaeria maculans causing blackleg disease in canola (Brassica napus L.)

(2012) Rosy Raman et al.   THEORETICAL AND APPLIED GENETICS

Screening synteny blocks in pairwise genome comparisons through integer programming

(2011) Haibao Tang et al.   BMC BIOINFORMATICS

The genome of the mesopolyploid crop species Brassica rapa

(2011) Xiaowu Wang et al.   NATURE GENETICS

Polyploid formation pathways have an impact on genetic rearrangements in resynthesized Brassica napus

(2011) E. Szadkowski et al.   NEW PHYTOLOGIST

InterPro in 2011: new developments in the family and domain prediction database

(2011) S. Hunter et al.   NUCLEIC ACIDS RESEARCH

De novogenetic variation associated with retrotransposon activation, genomic rearrangements and trait variation in a recombinant inbred line population ofBrassica napusderived from interspecific hybridization withBrassica rapa

(2011) Jun Zou et al.   PLANT JOURNAL

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

Hidden Markov model speed heuristic and iterative HMM search procedure

(2010) L Steven Johnson et al.   BMC BIOINFORMATICS

The first meiosis of resynthesized Brassica napus, a genome blender

(2010) E. Szadkowski et al.   NEW PHYTOLOGIST

The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

(2010) S. Ossowski et al.   SCIENCE

Biosynthesis of glucosinolates – gene discovery and beyond

(2010) Ida E. Sønderby et al.   TRENDS IN PLANT SCIENCE

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

BSMAP: whole genome bisulfite sequence MAPping program

(2009) Yuanxin Xi et al.   BMC BIOINFORMATICS

Homoeologous recombination in allopolyploids: the polyploid ratchet

(2009) Robert T. Gaeta et al.   NEW PHYTOLOGIST

Synteny and Collinearity in Plant Genomes

(2008) H. Tang et al.   SCIENCE