Population Genomic Analysis Reveals Differential Evolutionary Histories and Patterns of Diversity across Subgenomes and Subpopulations of Brassica napus L.

Chemical variation for leaf cuticular waxes and their levels revealed in a diverse panel of Brassica napus L .

(2016) Erica E. Tassone et al.   INDUSTRIAL CROPS AND PRODUCTS

Centromere Locations in Brassica A and C Genomes Revealed Through Half-Tetrad Analysis

(2015) A. S. Mason et al.   GENETICS

Linkage disequilibrium network analysis (LDna) gives a global view of chromosomal inversions, local adaptation and geographic structure

(2015) Petri Kemppainen et al.   Molecular Ecology Resources

Recombination in diverse maize is stable, predictable, and associated with genetic load

(2015) Eli Rodgers-Melnick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

On the Robustness to Gene Tree Estimation Error (or lack thereof) of Coalescent-Based Species Tree Methods

(2015) Sebastien Roch et al.   SYSTEMATIC BIOLOGY

Identification of Putative Candidate Genes for Water Stress Tolerance in Canola (Brassica napus)

(2015) Jing Zhang et al.   Frontiers in Plant Science

Genome-wide association mapping unravels the genetic control of seed germination and vigor in Brassica napus

(2015) Sarah V. Hatzig et al.   Frontiers in Plant Science

Identification of Candidate Genes for Seed Glucosinolate Content Using Association Mapping in Brassica napus L.

(2015) Cun-Min Qu et al.   Genes

Sub-genomic selection patterns as a signature of breeding in the allopolyploid Brassica napus genome

(2015) Lunwen Qian et al.   BMC GENOMICS

Genome-wide association tests of inversions with application to psoriasis

(2014) Jianzhong Ma et al.   HUMAN GENETICS

A Complex Recombination Pattern in the Genome of Allotetraploid Brassica napus as Revealed by a High-Density Genetic Map

(2014) Guangqin Cai et al.   PLoS One

Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

(2014) B. Chalhoub et al.   SCIENCE

Advances and limits of using population genetics to understand local adaptation

(2014) Peter Tiffin et al.   TRENDS IN ECOLOGY & EVOLUTION

Capturing sequence variation among flowering-time regulatory gene homologs in the allopolyploid crop species Brassica napus

(2014) Sarah Schiessl et al.   Frontiers in Plant Science

High-density SNP-based genetic map development and linkage disequilibrium assessment in Brassica napus L

(2013) Régine Delourme et al.   BMC GENOMICS

Review: Breeding spring canola (Brassica napus L.) by the use of exotic germplasm

(2013) Habibur Rahman   CANADIAN JOURNAL OF PLANT SCIENCE

Estimating and interpreting FST: The impact of rare variants

(2013) G. Bhatia et al.   GENOME RESEARCH

Computational approaches to species phylogeny inference and gene tree reconciliation

(2013) Luay Nakhleh   TRENDS IN ECOLOGY & EVOLUTION

Common inversion polymorphism at 17q21.31 affects expression of multiple genes in tissue-specific manner

(2012) Simone de Jong et al.   BMC GENOMICS

The Effect of Genomic Inversions on Estimation of Population Genetic Parameters from SNP Data

(2012) N.-K. Seich al Basatena et al.   GENETICS

Sequence-Based Genotyping for Marker Discovery and Co-Dominant Scoring in Germplasm and Populations

(2012) Hoa T. Truong et al.   PLoS One

Investigation of Inversion Polymorphisms in the Human Genome Using Principal Components Analysis

(2012) Jianzhong Ma et al.   PLoS One

Recent Explosive Human Population Growth Has Resulted in an Excess of Rare Genetic Variants

(2012) A. Keinan et al.   SCIENCE

Genetic and physical mapping of flowering time loci in canola (Brassica napus L.)

(2012) Harsh Raman et al.   THEORETICAL AND APPLIED GENETICS

Genotyping-by-Sequencing for Plant Breeding and Genetics

(2012) Jesse A. Poland et al.   Plant Genome

Integration of linkage maps for the Amphidiploid Brassica napus and comparative mapping with Arabidopsis and Brassica rapa

(2011) Jun Wang et al.   BMC GENOMICS

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

De novogenetic variation associated with retrotransposon activation, genomic rearrangements and trait variation in a recombinant inbred line population ofBrassica napusderived from interspecific hybridization withBrassica rapa

(2011) Jun Zou et al.   PLANT JOURNAL

Patterns of molecular variation in a species-wide germplasm set of Brassica napus

(2011) Anja Bus et al.   THEORETICAL AND APPLIED GENETICS

Origins of the amphiploid species Brassica napus L. investigated by chloroplast and nuclear molecular markers

(2010) Charlotte J Allender et al.   BMC PLANT BIOLOGY

Genetic diversity of Canadian elite summer rape (Brassica napus L.) cultivars from the pre- to post-canola quality era

(2010) Y -B. Fu et al.   CANADIAN JOURNAL OF PLANT SCIENCE

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Reconstructing Indian population history

(2009) David Reich et al.   NATURE

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

(2009) Peter J. A. Cock et al.   NUCLEIC ACIDS RESEARCH

Divergent patterns of allelic diversity from similar origins: the case of oilseed rape (Brassica napus L.) in China and Australia

(2008) S. Chen et al.   GENOME