Role of cleavage and polyadenylation specificity factor 100: anchoring poly(A) sites and modulating transcription termination

Genome-wide dynamics of alternative polyadenylation in rice

(2016) Haihui Fu et al.   GENOME RESEARCH

Argonautes team up to silence transposable elements in Arabidopsis

(2015) C. J. Underwood et al.   EMBO JOURNAL

Pcf11 orchestrates transcription termination pathways in yeast

(2015) Pawel Grzechnik et al.   GENES & DEVELOPMENT

Transcription termination and the control of the transcriptome: why, where and how to stop

(2015) Odil Porrua et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms

(2015) Rubén Gustavo Schlaen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In vivo characterization of the Drosophila mRNA 3' end processing core cleavage complex

(2015) D. Michalski et al.   RNA

Systematic Profiling of Poly(A)+ Transcripts Modulated by Core 3’ End Processing and Splicing Factors Reveals Regulatory Rules of Alternative Cleavage and Polyadenylation

(2015) Wencheng Li et al.   PLoS Genetics

CPSF30 and Wdr33 directly bind to AAUAAA in mammalian mRNA 3′ processing

(2014) Serena L. Chan et al.   GENES & DEVELOPMENT

Reconstitution of CPSF active in polyadenylation: recognition of the polyadenylation signal by WDR33

(2014) Lars Schönemann et al.   GENES & DEVELOPMENT

THOC5 controls 3′end-processing of immediate early genes via interaction with polyadenylation specific factor 100 (CPSF100)

(2014) Doan Duy Hai Tran et al.   NUCLEIC ACIDS RESEARCH

The Polyadenylation Factor Subunit CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR30: A Key Factor of Programmed Cell Death and a Regulator of Immunity in Arabidopsis

(2014) Q. Bruggeman et al.   PLANT PHYSIOLOGY

Integration of Developmental and Environmental Signals via a Polyadenylation Factor in Arabidopsis

(2014) Man Liu et al.   PLoS One

The regulatory role of Pcf11-similar-4 (PCFS4) in Arabidopsis development by genome-wide physical interactions with target loci

(2013) Denghui Xing et al.   BMC GENOMICS

Gene Expression Is Circular: Factors for mRNA Degradation Also Foster mRNA Synthesis

(2013) Gal Haimovich et al.   CELL

High throughput characterizations of poly(A) site choice in plants

(2013) Liuyin Ma et al.   METHODS

Alternative cleavage and polyadenylation: extent, regulation and function

(2013) Ran Elkon et al.   NATURE REVIEWS GENETICS

Role of alternative polyadenylation in epigenetic silencing and antisilencing

(2013) L. Ma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Alternative cleavage and polyadenylation: the long and short of it

(2013) Bin Tian et al.   TRENDS IN BIOCHEMICAL SCIENCES

Making ends meet: coordination between RNA 3′-end processing and transcription initiation

(2013) Pia K. Andersen et al.   Wiley Interdisciplinary Reviews-RNA

Transcription: another mark in the tail

(2012) Jesper Q Svejstrup   EMBO JOURNAL

Interactions of Sen1, Nrd1, and Nab3 with Multiple Phosphorylated Forms of the Rpb1 C-Terminal Domain in Saccharomyces cerevisiae

(2012) Karen Chinchilla et al.   EUKARYOTIC CELL

Analysis of alternative cleavage and polyadenylation by 3′ region extraction and deep sequencing

(2012) Mainul Hoque et al.   NATURE METHODS

Genome-Wide Control of Polyadenylation Site Choice by CPSF30 in Arabidopsis

(2012) P. E. Thomas et al.   PLANT CELL

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

RNA 3' processing functions of Arabidopsis FCA and FPA limit intergenic transcription

(2011) C. Sonmez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation

(2011) X. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pre-mRNA splicing during transcription in the mammalian system

(2011) Amy Pandya-Jones   Wiley Interdisciplinary Reviews-RNA

On track with P-bodies

(2010) Meeta Kulkarni et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Phosphorylation of TFIIB Links Transcription Initiation and Termination

(2010) Yuming Wang et al.   CURRENT BIOLOGY

The Spen Family Protein FPA Controls Alternative Cleavage and Polyadenylation of RNA

(2010) Csaba Hornyik et al.   DEVELOPMENTAL CELL

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

Alternative polyadenylation and gene expression regulation in plants

(2010) Denghui Xing et al.   Wiley Interdisciplinary Reviews-RNA

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Arabidopsis thaliana PRP40s are RNA polymerase II C-terminal domain-associating proteins

(2009) Chang Ho Kang et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Distinctive interactions of the Arabidopsis homolog of the 30 kD subunit of the cleavage and polyadenylation specificity factor (AtCPSF30) with other polyadenylation factor subunits

(2009) Suryadevara Rao et al.   BMC CELL BIOLOGY

Molecular Architecture of the Human Pre-mRNA 3′ Processing Complex

(2009) Yongsheng Shi et al.   MOLECULAR CELL

Unique Features of Plant Cleavage and Polyadenylation Specificity Factor Revealed by Proteomic Studies

(2009) H. Zhao et al.   PLANT PHYSIOLOGY

Kismeth: Analyzer of plant methylation states through bisulfite sequencing

(2008) Eyal Gruntman et al.   BMC BIOINFORMATICS

Arabidopsis mRNA polyadenylation machinery: comprehensive analysis of protein-protein interactions and gene expression profiling

(2008) Arthur G Hunt et al.   BMC GENOMICS

Conserved motifs in both CPSF73 and CPSF100 are required to assemble the active endonuclease for histone mRNA 3′-end maturation

(2008) Nikolay G Kolev et al.   EMBO REPORTS

Genome level analysis of rice mRNA 3′-end processing signals and alternative polyadenylation

(2008) Yingjia Shen et al.   NUCLEIC ACIDS RESEARCH

A Polyadenylation Factor Subunit Implicated in Regulating Oxidative Signaling in Arabidopsis thaliana

(2008) Jingxian Zhang et al.   PLoS One