Association of the gut microbiota mobilome with hospital location and birth weight in preterm infants

Development of a Gestational Age–Specific Case Definition for Neonatal Necrotizing Enterocolitis

(2017) Cheryl Battersby et al.   JAMA Pediatrics

Gut bacteria dysbiosis and necrotising enterocolitis in very low birthweight infants: a prospective case-control study

(2016) Barbara B Warner et al.   LANCET

Survival and Evolution of a Large Multidrug Resistance Plasmid in New Clinical Bacterial Hosts

(2016) Andreas Porse et al.   MOLECULAR BIOLOGY AND EVOLUTION

Necrotizing enterocolitis and preterm infant gut bacteria

(2016) Barbara B. Warner et al.   Seminars in Fetal & Neonatal Medicine

Impact of hospital-based environmental exposures on neurodevelopmental outcomes of preterm infants

(2015) Janelle Santos et al.   CURRENT OPINION IN PEDIATRICS

Intestinal microbiota and its relationship with necrotizing enterocolitis

(2015) Ravi Mangal Patel et al.   PEDIATRIC RESEARCH

Factors influencing gastrointestinal tract and microbiota immune interaction in preterm infants

(2015) María Carmen Collado et al.   PEDIATRIC RESEARCH

The commensal infant gut meta-mobilome as a potential reservoir for persistent multidrug resistance integrons

(2015) Anuradha Ravi et al.   Scientific Reports

Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants

(2014) Brandon Brooks et al.   Microbiome

Role of plasmid- and chromosomally encoded Hha proteins in modulation of gene expression in E. coli O157:H7

(2013) Sonia Paytubi et al.   PLASMID

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

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Identification of acquired antimicrobial resistance genes

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Evaluation of qPCR curve analysis methods for reliable biomarker discovery: Bias, resolution, precision, and implications

(2012) Jan M. Ruijter et al.   METHODS

Plasmids in Gram negatives: Molecular typing of resistance plasmids

(2011) Alessandra Carattoli   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Microreview: Type IV secretion systems: versatility and diversity in function

(2010) Karin Wallden et al.   CELLULAR MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Resistance Plasmid Families in Enterobacteriaceae

(2009) A. Carattoli   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Mortality of necrotizing enterocolitis expressed by birth weight categories

(2009) Shimae Cross Fitzgibbons et al.   JOURNAL OF PEDIATRIC SURGERY

Pathogenomics of the Virulence Plasmids of Escherichia coli

(2009) T. J. Johnson et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Conjugative plasmids: vessels of the communal gene pool

(2009) A. Norman et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Genome-wide analysis of the interaction between the endosymbiotic bacterium Wolbachia and its Drosophila host

(2008) Zhiyong Xi et al.   BMC GENOMICS