Determining the folding and binding free energy of DNA-based nanodevices and nanoswitches using urea titration curves

Minimalist Approach to Complexity: Templating the Assembly of DNA Tile Structures with Sequentially Grown Input Strands

(2016) Kai Lin Lau et al.   ACS Nano

Native characterization of nucleic acid motif thermodynamics via non-covalent catalysis

(2016) Chunyan Wang et al.   Nature Communications

General Strategy to Introduce pH-Induced Allostery in DNA-Based Receptors to Achieve Controlled Release of Ligands

(2015) Alessandro Porchetta et al.   NANO LETTERS

DNA nanotechnology from the test tube to the cell

(2015) Yuan-Jyue Chen et al.   Nature Nanotechnology

Influence of 5-N-carboxamide modifications on the thermodynamic stability of oligonucleotides

(2015) Steven K. Wolk et al.   NUCLEIC ACIDS RESEARCH

Kinetic and Equilibrium Binding Characterization of Aptamers to Small Molecules using a Label-Free, Sensitive, and Scalable Platform

(2014) Andrew L. Chang et al.   ANALYTICAL CHEMISTRY

Toehold Switches: De-Novo-Designed Regulators of Gene Expression

(2014) Alexander A. Green et al.   CELL

Programmable pH-Triggered DNA Nanoswitches

(2014) Andrea Idili et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Thermodynamic Basis for Engineering High-Affinity, High-Specificity Binding-Induced DNA Clamp Nanoswitches

(2013) Andrea Idili et al.   ACS Nano

DNA Nanotechnology: From Sensing and DNA Machines to Drug-Delivery Systems

(2013) Chun-Hua Lu et al.   ACS Nano

Temperature-Controlled Encapsulation and Release of an Active Enzyme in the Cavity of a Self-Assembled DNA Nanocage

(2013) Sissel Juul et al.   ACS Nano

Ligand binding analysis and screening by chemical denaturation shift

(2013) Arne Schön et al.   ANALYTICAL BIOCHEMISTRY

Self-Assembly of DNA Origami and Single-Stranded Tile Structures at Room Temperature

(2013) Zhao Zhang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

A comparison of the folding kinetics of a small, artificially selected DNA aptamer with those of equivalently simple naturally occurring proteins

(2013) Camille Lawrence et al.   PROTEIN SCIENCE

Denaturation of RNA Secondary and Tertiary Structure by Urea: Simple Unfolded State Models and Free Energy Parameters Account for Measured m-Values

(2012) Dominic Lambert et al.   BIOCHEMISTRY

G-quadruplex DNA Aptamers and their Ligands: Structure, Function and Application

(2012) W. O. Tucker et al.   CURRENT PHARMACEUTICAL DESIGN

DNA-based self-assembly of chiral plasmonic nanostructures with tailored optical response

(2012) Anton Kuzyk et al.   NATURE

A DNA-based molecular motor that can navigate a network of tracks

(2012) Shelley F. J. Wickham et al.   Nature Nanotechnology

Synthetic Lipid Membrane Channels Formed by Designed DNA Nanostructures

(2012) M. Langecker et al.   SCIENCE

A Logic-Gated Nanorobot for Targeted Transport of Molecular Payloads

(2012) S. M. Douglas et al.   SCIENCE

A Hemin/G-Quadruplex Acts as an NADH Oxidase and NADH Peroxidase Mimicking DNAzyme

(2011) Eyal Golub et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Reversible Logic Circuits Made of DNA

(2011) Anthony J. Genot et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Quantifying why urea is a protein denaturant, whereas glycine betaine is a protein stabilizer

(2011) E. J. Guinn et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

NUPACK: Analysis and design of nucleic acid systems

(2010) Joseph N. Zadeh et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

DNA computing circuits using libraries of DNAzyme subunits

(2010) Johann Elbaz et al.   Nature Nanotechnology

Supramolecular Cocaine−Aptamer Complexes Activate Biocatalytic Cascades

(2009) Ronit Freeman et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Self-assembly of a nanoscale DNA box with a controllable lid

(2009) Ebbe S. Andersen et al.   NATURE

A DNA nanomachine that maps spatial and temporal pH changes inside living cells

(2009) Souvik Modi et al.   Nature Nanotechnology

Thermodynamic basis for the optimization of binding-induced biomolecular switches and structure-switching biosensors

(2009) A. Vallee-Belisle et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Calorimetry and Thermodynamics in Drug Design

(2008) Jonathan B. Chaires   Annual Review of Biophysics

Isothermal Assembly of DNA Origami Structures Using Denaturing Agents

(2008) Ralf Jungmann et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Stability and kinetics of G-quadruplex structures

(2008) A. N. Lane et al.   NUCLEIC ACIDS RESEARCH

IDT SciTools: a suite for analysis and design of nucleic acid oligomers

(2008) R. Owczarzy et al.   NUCLEIC ACIDS RESEARCH