SLiMSearch: a framework for proteome-wide discovery and annotation of functional modules in intrinsically disordered regions

A Conserved Motif Provides Binding Specificity to the PP2A-B56 Phosphatase

(2016) Emil Peter Thrane Hertz et al.   MOLECULAR CELL

ProViz—a web-based visualization tool to investigate the functional and evolutionary features of protein sequences

(2016) Peter Jehl et al.   NUCLEIC ACIDS RESEARCH

High-throughput methods for identification of protein-protein interactions involving short linear motifs

(2015) Cecilia Blikstad et al.   Cell Communication and Signaling

Experimental detection of short regulatory motifs in eukaryotic proteins: tips for good practice as well as for bad

(2015) Toby J. Gibson et al.   Cell Communication and Signaling

Short linear motifs – ex nihilo evolution of protein regulation

(2015) Norman E. Davey et al.   Cell Communication and Signaling

The ABBA Motif Binds APC/C Activators and Is Shared by APC/C Substrates and Regulators

(2015) Barbara Di Fiore et al.   DEVELOPMENTAL CELL

ELM 2016—data update and new functionality of the eukaryotic linear motif resource

(2015) Holger Dinkel et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Short Linear Motifs: Ubiquitous and Functionally Diverse Protein Interaction Modules Directing Cell Regulation

(2014) Kim Van Roey et al.   CHEMICAL REVIEWS

Multiple mechanisms determine the order of APC/C substrate degradation in mitosis

(2014) Dan Lu et al.   JOURNAL OF CELL BIOLOGY

A Million Peptide Motifs for the Molecular Biologist

(2014) Peter Tompa et al.   MOLECULAR CELL

A series of PDB-related databanks for everyday needs

(2014) Wouter G. Touw et al.   NUCLEIC ACIDS RESEARCH

UniProt: a hub for protein information

(2014)   NUCLEIC ACIDS RESEARCH

DoReMi: context-based prioritization of linear motif matches

(2014) Heiko Horn et al.   PeerJ

The identification of short linear motif-mediated interfaces within the human interactome

(2012) R. J. Weatheritt et al.   BIOINFORMATICS

Motif switches: decision-making in cell regulation

(2012) Kim Van Roey et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Linear motifs confer functional diversity onto splice variants

(2012) Robert J. Weatheritt et al.   NUCLEIC ACIDS RESEARCH

SLiMPrints: conservation-based discovery of functional motif fingerprints in intrinsically disordered protein regions

(2012) Norman E. Davey et al.   NUCLEIC ACIDS RESEARCH

Intrinsically disordered proteins: a 10-year recap

(2012) Peter Tompa   TRENDS IN BIOCHEMICAL SCIENCES

Attributes of short linear motifs

(2011) Norman E. Davey et al.   Molecular BioSystems

SLiMSearch 2.0: biological context for short linear motifs in proteins

(2011) N. E. Davey et al.   NUCLEIC ACIDS RESEARCH

ELM--the database of eukaryotic linear motifs

(2011) H. Dinkel et al.   NUCLEIC ACIDS RESEARCH

Minimotif Miner 3.0: database expansion and significantly improved reduction of false-positive predictions from consensus sequences

(2011) T. Mi et al.   NUCLEIC ACIDS RESEARCH

PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse

(2011) P. V. Hornbeck et al.   NUCLEIC ACIDS RESEARCH

Phospho.ELM: a database of phosphorylation sites--update 2011

(2010) H. Dinkel et al.   NUCLEIC ACIDS RESEARCH

Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery

(2009) Norman E. Davey et al.   BIOINFORMATICS

A structure filter for the Eukaryotic Linear Motif Resource

(2009) Allegra Via et al.   BMC BIOINFORMATICS

A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences

(2008) Claudia Chica et al.   BMC BIOINFORMATICS