SLiMSearch 2.0: biological context for short linear motifs in proteins

SLiMFinder: a web server to find novel, significantly over-represented, short protein motifs

(2010) N. E. Davey et al.   NUCLEIC ACIDS RESEARCH

Ensembl 2011

(2010) P. Flicek et al.   NUCLEIC ACIDS RESEARCH

The BioGRID Interaction Database: 2011 update

(2010) C. Stark et al.   NUCLEIC ACIDS RESEARCH

Ongoing and future developments at the Universal Protein Resource

(2010)   NUCLEIC ACIDS RESEARCH

The RCSB Protein Data Bank: redesigned web site and web services

(2010) P. W. Rose et al.   NUCLEIC ACIDS RESEARCH

Large-Scale Discovery and Characterization of Protein Regulatory Motifs in Eukaryotes

(2010) Daniel S. Lieber et al.   PLoS One

Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery

(2009) Norman E. Davey et al.   BIOINFORMATICS

A structure filter for the Eukaryotic Linear Motif Resource

(2009) Allegra Via et al.   BMC BIOINFORMATICS

ELM: the status of the 2010 eukaryotic linear motif resource

(2009) Cathryn M. Gould et al.   NUCLEIC ACIDS RESEARCH

PROSITE, a protein domain database for functional characterization and annotation

(2009) Christian J. A. Sigrist et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

CompariMotif: quick and easy comparisons of sequence motifs

(2008) R. J. Edwards et al.   BIOINFORMATICS

A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences

(2008) Claudia Chica et al.   BMC BIOINFORMATICS

Recent developments in the MAFFT multiple sequence alignment program

(2008) K. Katoh et al.   BRIEFINGS IN BIOINFORMATICS

Understanding eukaryotic linear motifs and their role in cell signaling and regulation

(2008) Francesca Diella   Frontiers in Bioscience-Landmark

Minimotif miner 2nd release: a database and web system for motif search

(2008) S. Rajasekaran et al.   NUCLEIC ACIDS RESEARCH