Dynamic reorganization of open chromatin underlies diverse transcriptomes during spermatogenesis
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Title
Dynamic reorganization of open chromatin underlies diverse transcriptomes during spermatogenesis
Authors
Keywords
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Journal
NUCLEIC ACIDS RESEARCH
Volume 46, Issue 2, Pages 593-608
Publisher
Oxford University Press (OUP)
Online
2017-11-03
DOI
10.1093/nar/gkx1052
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Note: Only part of the references are listed.- Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis
- (2017) Jun Ueda et al. Cell Reports
- Regulatory complexity revealed by integrated cytological and RNA-seq analyses of meiotic substages in mouse spermatocytes
- (2016) Robyn L. Ball et al. BMC GENOMICS
- Transcriptome analysis of highly purified mouse spermatogenic cell populations: gene expression signatures switch from meiotic-to postmeiotic-related processes at pachytene stage
- (2016) Irene da Cruz et al. BMC GENOMICS
- The evolutionary turnover of recombination hot spots contributes to speciation in mice
- (2016) Fatima Smagulova et al. GENES & DEVELOPMENT
- The landscape of accessible chromatin in mammalian preimplantation embryos
- (2016) Jingyi Wu et al. NATURE
- Parallel evolution of male germline epigenetic poising and somatic development in animals
- (2016) Bluma J Lesch et al. NATURE GENETICS
- Spermatogenesis: The Commitment to Meiosis
- (2016) Michael D. Griswold PHYSIOLOGICAL REVIEWS
- Poised chromatin and bivalent domains facilitate the mitosis-to-meiosis transition in the male germline
- (2015) Ho-Su Sin et al. BMC BIOLOGY
- DNA methylation and gene expression dynamics during spermatogonial stem cell differentiation in the early postnatal mouse testis
- (2015) Naoki Kubo et al. BMC GENOMICS
- Chromosomes Progress to Metaphase in Multiple Discrete Steps via Global Compaction/Expansion Cycles
- (2015) Zhangyi Liang et al. CELL
- Trithorax and Polycomb group-dependent regulation: a tale of opposing activities
- (2015) S. J. Geisler et al. DEVELOPMENT
- SCML2 Establishes the Male Germline Epigenome through Regulation of Histone H2A Ubiquitination
- (2015) Kazuteru Hasegawa et al. DEVELOPMENTAL CELL
- Single-cell chromatin accessibility reveals principles of regulatory variation
- (2015) Jason D. Buenrostro et al. NATURE
- Recombination, Pairing, and Synapsis of Homologs during Meiosis
- (2015) Denise Zickler et al. Cold Spring Harbor Perspectives in Biology
- Affinity-seq detects genome-wide PRDM9 binding sites and reveals the impact of prior chromatin modifications on mammalian recombination hotspot usage
- (2015) Michael Walker et al. Epigenetics & Chromatin
- Retinoic Acid Receptors Control Spermatogonia Cell-Fate and Induce Expression of the SALL4A Transcription Factor
- (2015) Aurore Gely-Pernot et al. PLoS Genetics
- Regulation of gene transcription by Polycomb proteins
- (2015) S. Aranda et al. Science Advances
- Integrated transcriptome analysis of mouse spermatogenesis
- (2014) Gennady Margolin et al. BMC GENOMICS
- Chromatin and Transcription Transitions of Mammalian Adult Germline Stem Cells and Spermatogenesis
- (2014) Saher Sue Hammoud et al. Cell Stem Cell
- Chromatin Repressive Complexes in Stem Cells, Development, and Cancer
- (2014) Anne Laugesen et al. Cell Stem Cell
- Poised chromatin in the mammalian germ line
- (2014) B. J. Lesch et al. DEVELOPMENT
- Motif-based analysis of large nucleotide data sets using MEME-ChIP
- (2014) Wenxiu Ma et al. Nature Protocols
- In Vivo Epigenomic Profiling of Germ Cells Reveals Germ Cell Molecular Signatures
- (2013) Jia-Hui Ng et al. DEVELOPMENTAL CELL
- The great escape
- (2013) Ho-Su Sin et al. Epigenetics
- SFMBT1 functions with LSD1 to regulate expression of canonical histone genes and chromatin-related factors
- (2013) J. Zhang et al. GENES & DEVELOPMENT
- ATR acts stage specifically to regulate multiple aspects of mammalian meiotic silencing
- (2013) H. Royo et al. GENES & DEVELOPMENT
- A double take on bivalent promoters
- (2013) P. Voigt et al. GENES & DEVELOPMENT
- Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
- (2013) Jason D Buenrostro et al. NATURE METHODS
- Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa
- (2013) Serap Erkek et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- A set of genes critical to development is epigenetically poised in mouse germ cells from fetal stages through completion of meiosis
- (2013) B. J. Lesch et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cellular Source and Mechanisms of High Transcriptome Complexity in the Mammalian Testis
- (2013) Magali Soumillon et al. Cell Reports
- Bivalent Chromatin Marks Developmental Regulatory Genes in the Mouse Embryonic Germline In Vivo
- (2013) Michael Sachs et al. Cell Reports
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Sex chromosome inactivation in germ cells: emerging roles of DNA damage response pathways
- (2012) Yosuke Ichijima et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- RNF8 regulates active epigenetic modifications and escape gene activation from inactive sex chromosomes in post-meiotic spermatids
- (2012) H.-S. Sin et al. GENES & DEVELOPMENT
- Human postmeiotic sex chromatin and its impact on sex chromosome evolution
- (2012) H.-S. Sin et al. GENOME RESEARCH
- Sensitive mapping of recombination hotspots using sequencing-based detection of ssDNA
- (2012) P. P. Khil et al. GENOME RESEARCH
- DNA Demethylation and USF Regulate the Meiosis-Specific Expression of the Mouse Miwi
- (2012) Yu Hou et al. PLoS Genetics
- MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets
- (2012) Zhen Shao et al. GENOME BIOLOGY
- MEME-ChIP: motif analysis of large DNA datasets
- (2011) Philip Machanick et al. BIOINFORMATICS
- MDC1 directs chromosome-wide silencing of the sex chromosomes in male germ cells
- (2011) Y. Ichijima et al. GENES & DEVELOPMENT
- The evolution of gene expression levels in mammalian organs
- (2011) David Brawand et al. NATURE
- The POU Domain Transcription Factor POU3F1 Is an Important Intrinsic Regulator of GDNF-Induced Survival and Self-Renewal of Mouse Spermatogonial Stem Cells1
- (2010) Xin Wu et al. BIOLOGY OF REPRODUCTION
- Epigenetic Transitions in Germ Cell Development and Meiosis
- (2010) Satya K. Kota et al. DEVELOPMENTAL CELL
- GREAT improves functional interpretation of cis-regulatory regions
- (2010) Cory Y McLean et al. NATURE BIOTECHNOLOGY
- Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa
- (2010) Urszula Brykczynska et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- A Global Expression Switch Marks Pachytene Initiation during Mouse Male Meiosis
- (2010) Mohammad Fallahi et al. Genes
- Sox10 gain-of-function causes XX sex reversal in mice: implications for human 22q-linked disorders of sex development
- (2009) Juan Carlos Polanco et al. HUMAN MOLECULAR GENETICS
- Role of RNA-binding proteins in mammalian spermatogenesis
- (2009) Maria Paola Paronetto et al. INTERNATIONAL JOURNAL OF ANDROLOGY
- Distinctive chromatin in human sperm packages genes for embryo development
- (2009) Saher Sue Hammoud et al. NATURE
- MEME SUITE: tools for motif discovery and searching
- (2009) T. L. Bailey et al. NUCLEIC ACIDS RESEARCH
- An Abundance of Ubiquitously Expressed Genes Revealed by Tissue Transcriptome Sequence Data
- (2009) Daniel Ramsköld et al. PLoS Computational Biology
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Epigenetic events in mammalian germ-cell development: reprogramming and beyond
- (2008) Hiroyuki Sasaki et al. NATURE REVIEWS GENETICS
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
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