The transcriptional regulatory network mediated by banana (Musa acuminata ) dehydration-responsive element binding (MaDREB) transcription factors in fruit ripening

BananaMaMADSTranscription Factors Are Necessary for Fruit Ripening and Molecular Tools to Promote Shelf-Life and Food Security

(2016) Tomer Elitzur et al.   PLANT PHYSIOLOGY

Genome-wide analysis of the AP2/ERF family in Musa species reveals divergence and neofunctionalisation during evolution

(2016) Deepika Lakhwani et al.   Scientific Reports

A novel CBF that regulates abiotic stress response and the ripening process in oil palm (Elaeis guineensis) fruits

(2015) Mortaza Ebrahimi et al.   Tree Genetics & Genomes

Transcriptome analysis of ripe and unripe fruit tissue of banana identifies major metabolic networks involved in fruit ripening process

(2014) Mehar Hasan Asif et al.   BMC PLANT BIOLOGY

ThePopulusARBORKNOX1 homeodomain transcription factor regulates woody growth through binding to evolutionarily conserved target genes of diverse function

(2014) Lijun Liu et al.   NEW PHYTOLOGIST

Transcriptional Regulation of Fruit Ripening by Tomato FRUITFULL Homologs and Associated MADS Box Proteins

(2014) M. Fujisawa et al.   PLANT CELL

A Functional and Evolutionary Perspective on Transcription Factor Binding in Arabidopsis thaliana

(2014) K. S. Heyndrickx et al.   PLANT CELL

Arabidopsis Phytochrome A Directly Targets Numerous Promoters for Individualized Modulation of Genes in a Wide Range of Pathways

(2014) F. Chen et al.   PLANT CELL

A ripening-induced transcription factor MaBSD1 interacts with promoters of MaEXP1/2 from banana fruit

(2014) Liang-jie Ba et al.   PLANT CELL REPORTS

The Banana MaLBD (LATERAL ORGAN BOUNDARIES DOMAIN) Transcription Factors Regulate EXPANSIN Expression and Are Involved in Fruit Ripening

(2014) Liang-jie Ba et al.   PLANT MOLECULAR BIOLOGY REPORTER

Fruit Development and Ripening

(2013) Graham B. Seymour et al.   Annual Review of Plant Biology

Banana ethylene response factors are involved in fruit ripening through their interactions with ethylene biosynthesis genes

(2013) Yun-yi Xiao et al.   JOURNAL OF EXPERIMENTAL BOTANY

Isolation and Characterization of Dehydration-Responsive Element-Binding Factor 2C (MsDREB2C) from Malus sieversii Roem.

(2013) Kai Zhao et al.   PLANT AND CELL PHYSIOLOGY

A Large-Scale Identification of Direct Targets of the Tomato MADS Box Transcription Factor RIPENING INHIBITOR Reveals the Regulation of Fruit Ripening

(2013) M. Fujisawa et al.   PLANT CELL

Molecular characterization of banana NAC transcription factors and their interactions with ethylene signalling component EIL during fruit ripening

(2012) Wei Shan et al.   JOURNAL OF EXPERIMENTAL BOTANY

The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

(2012) Angélique D’Hont et al.   NATURE

Molecular characterization of a stress-response bZIP transcription factor in banana

(2012) Sen He et al.   PLANT CELL TISSUE AND ORGAN CULTURE

A Ser/Thr protein kinase phosphorylates MA-ACS1 (Musa acuminata 1-aminocyclopropane-1-carboxylic acid synthase 1) during banana fruit ripening

(2012) Swarup Roy Choudhury et al.   PLANTA

Characterization of an AGAMOUS-like MADS Box Protein, a Probable Constituent of Flowering and Fruit Ripening Regulatory System in Banana

(2012) Swarup Roy Choudhury et al.   PLoS One

Proteomic analysis of banana fruit reveals proteins that are differentially accumulated during ripening

(2012) Tatiana Torres Toledo et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY

Histone deacetylase HD2 interacts with ERF1 and is involved in longan fruit senescence

(2011) Jian-fei Kuang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Role of DREBs in regulation of abiotic stress responses in plants

(2011) C. Lata et al.   JOURNAL OF EXPERIMENTAL BOTANY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Identification and expression analysis of four 14-3-3 genes during fruit ripening in banana (Musa acuminata L. AAA group, cv. Brazilian)

(2011) Mei-Ying Li et al.   PLANT CELL REPORTS

The Tomato MADS-Box Transcription Factor RIPENING INHIBITOR Interacts with Promoters Involved in Numerous Ripening Processes in a COLORLESS NONRIPENING-Dependent Manner

(2011) C. Martel et al.   PLANT PHYSIOLOGY

Validation of reference genes for RT-qPCR studies of gene expression in banana fruit under different experimental conditions

(2011) Lei Chen et al.   PLANTA

Molecular Characterization of a Strawberry FaASR Gene in Relation to Fruit Ripening

(2011) Jian-ye Chen et al.   PLoS One

Effect of high temperature on color, chlorophyll fluorescence and volatile biosynthesis in green-ripe banana fruit

(2011) Xiaotang Yang et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY

The regulation of MADS-box gene expression during ripening of banana and their regulatory interaction with ethylene

(2010) Tomer Elitzur et al.   JOURNAL OF EXPERIMENTAL BOTANY

Cloning of an ADP-ribosylation factor gene from banana (Musa acuminata) and its expression patterns in postharvest ripening fruit

(2010) Yuan Wang et al.   JOURNAL OF PLANT PHYSIOLOGY

Chromatin immunoprecipitation (ChIP) of plant transcription factors followed by sequencing (ChIP-SEQ) or hybridization to whole genome arrays (ChIP-CHIP)

(2010) Kerstin Kaufmann et al.   Nature Protocols

Kiwifruit EIL and ERF Genes Involved in Regulating Fruit Ripening

(2010) X.-r. Yin et al.   PLANT PHYSIOLOGY

Molecular Basis of Plant Cold Acclimation: Insights Gained from Studying the CBF Cold Response Pathway

(2010) M. F. Thomashow   PLANT PHYSIOLOGY

Plant NAC-type transcription factor proteins contain a NARD domain for repression of transcriptional activation

(2010) Yu-Jun Hao et al.   PLANTA

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Ripening of fleshy fruit: Molecular insight and the role of ethylene

(2009) Vishwas A. Bapat et al.   BIOTECHNOLOGY ADVANCES

Expression patterns of cell wall-modifying genes from banana during fruit ripening and in relationship with finger drop

(2009) D. Mbéguié-A-Mbéguié et al.   JOURNAL OF EXPERIMENTAL BOTANY

Using ChIP-chip and ChIP-seq to study the regulation of gene expression: Genome-wide localization studies reveal widespread regulation of transcription elongation

(2009) Daniel A. Gilchrist et al.   METHODS

Transcriptional Regulatory Networks in Response to Abiotic Stresses in Arabidopsis and Grasses

(2009) K. Nakashima et al.   PLANT PHYSIOLOGY

A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening

(2008) Zhefeng Lin et al.   PLANT JOURNAL

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY