UbiGate: a synthetic biology toolbox to analyse ubiquitination

Changes in PUB22 Ubiquitination Modes Triggered by MITOGEN-ACTIVATED PROTEIN KINASE3 Dampen the Immune Response

(2017) Giulia Furlan et al.   PLANT CELL

Reconstitution of the plant ubiquitination cascade in bacteria using a synthetic biology approach

(2017) Yufang Han et al.   PLANT JOURNAL

Variation in auxin sensing guides AUX/IAA transcriptional repressor ubiquitylation and destruction

(2017) Martin Winkler et al.   Nature Communications

E2 enzymes: more than just middle men

(2016) Mikaela D Stewart et al.   CELL RESEARCH

A bacterial genetic selection system for ubiquitylation cascade discovery

(2016) Olga Levin-Kravets et al.   NATURE METHODS

Structure of ubiquitylated-Rpn10 provides insight into its autoregulation mechanism

(2016) Tal Keren-Kaplan et al.   Nature Communications

Elucidation of the biosynthesis of carnosic acid and its reconstitution in yeast

(2016) Ulschan Scheler et al.   Nature Communications

A Highly Characterized Yeast Toolkit for Modular, Multipart Assembly

(2015) Michael E. Lee et al.   ACS Synthetic Biology

Targeted Proteomics Analysis of Protein Degradation in Plant Signaling on an LTQ-Orbitrap Mass Spectrometer

(2014) Petra Majovsky et al.   JOURNAL OF PROTEOME RESEARCH

K33-Linked Polyubiquitination of Coronin 7 by Cul3-KLHL20 Ubiquitin E3 Ligase Regulates Protein Trafficking

(2014) Wei-Chien Yuan et al.   MOLECULAR CELL

New insights into ubiquitin E3 ligase mechanism

(2014) Christopher E Berndsen et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

A Golden Gate Modular Cloning Toolbox for Plants

(2014) Carola Engler et al.   ACS Synthetic Biology

Pto Kinase Binds Two Domains of AvrPtoB and Its Proximity to the Effector E3 Ligase Determines if It Evades Degradation and Activates Plant Immunity

(2014) Johannes Mathieu et al.   PLoS Pathogens

Structure-based in silico identification of ubiquitin-binding domains provides insights into the ALIX-V:ubiquitin complex and retrovirus budding

(2013) Tal Keren-Kaplan et al.   EMBO JOURNAL

Transferred Subgroup False Discovery Rate for Rare Post-translational Modifications Detected by Mass Spectrometry

(2013) Yan Fu et al.   MOLECULAR & CELLULAR PROTEOMICS

A library of TAL effector nucleases spanning the human genome

(2013) Yongsub Kim et al.   NATURE BIOTECHNOLOGY

Arabidopsis ubiquitin ligase MIEL1 mediates degradation of the transcription factor MYB30 weakening plant defence

(2013) Daniel Marino et al.   Nature Communications

Ubiquitin and Membrane Protein Turnover: From Cradle to Grave

(2012) Jason A. MacGurn et al.   Annual Review of Biochemistry

TAL effector RVD specificities and efficiencies

(2012) Jana Streubel et al.   NATURE BIOTECHNOLOGY

Atypical ubiquitylation — the unexplored world of polyubiquitin beyond Lys48 and Lys63 linkages

(2012) Yogesh Kulathu et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The Ubiquitin Ligase PUB22 Targets a Subunit of the Exocyst Complex Required for PAMP-Triggered Responses in Arabidopsis

(2012) M. Stegmann et al.   PLANT CELL

Arabidopsis Ubiquitin Conjugase UBC32 Is an ERAD Component That Functions in Brassinosteroid-Mediated Salt Stress Tolerance

(2012) F. Cui et al.   PLANT CELL

Fast track assembly of multigene constructs using Golden Gate cloning and the MoClo system

(2012) Stefan Werner et al.   Bioengineered

Synthetic biology approach to reconstituting the ubiquitylation cascade in bacteria

(2011) Tal Keren-Kaplan et al.   EMBO JOURNAL

A Modular Cloning System for Standardized Assembly of Multigene Constructs

(2011) Ernst Weber et al.   PLoS One

Ubiquitin: Same Molecule, Different Degradation Pathways

(2010) Michael J. Clague et al.   CELL

K33-Linked Polyubiquitination of T Cell Receptor-ζ Regulates Proteolysis-Independent T Cell Signaling

(2010) Haining Huang et al.   IMMUNITY

Regulation and Cellular Roles of Ubiquitin-Specific Deubiquitinating Enzymes

(2009) Francisca E. Reyes-Turcu et al.   Annual Review of Biochemistry

RING Domain E3 Ubiquitin Ligases

(2009) Raymond J. Deshaies et al.   Annual Review of Biochemistry

Building ubiquitin chains: E2 enzymes at work

(2009) Yihong Ye et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Ubiquitin-like protein activation by E1 enzymes: the apex for downstream signalling pathways

(2009) Brenda A. Schulman et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The ubiquitin–26S proteasome system at the nexus of plant biology

(2009) Richard D. Vierstra   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Tape-Arabidopsis Sandwich - a simpler Arabidopsis protoplast isolation method

(2009) Fu-Hui Wu et al.   Plant Methods

Host Inhibition of a Bacterial Virulence Effector Triggers Immunity to Infection

(2009) V. Ntoukakis et al.   SCIENCE

Negative Regulation of PAMP-Triggered Immunity by an E3 Ubiquitin Ligase Triplet in Arabidopsis

(2008) Marco Trujillo et al.   CURRENT BIOLOGY

Histone H2B Monoubiquitination in the Chromatin of FLOWERING LOCUS C Regulates Flowering Time in Arabidopsis

(2008) Y. Cao et al.   PLANT CELL

A One Pot, One Step, Precision Cloning Method with High Throughput Capability

(2008) Carola Engler et al.   PLoS One